Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.69■□□□□ 0.9
DffbO54788 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DffbO54788 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
DffbO54788 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DffbO54788 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DffbO54788 Gm24804-201ENSMUST00000174982 85 ntBASIC20.68■□□□□ 0.9
DffbO54788 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
DffbO54788 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DffbO54788 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
DffbO54788 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DffbO54788 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DffbO54788 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
DffbO54788 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DffbO54788 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DffbO54788 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DffbO54788 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
DffbO54788 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
DffbO54788 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
DffbO54788 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DffbO54788 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
DffbO54788 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
DffbO54788 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
DffbO54788 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
DffbO54788 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
DffbO54788 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
DffbO54788 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DffbO54788 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
DffbO54788 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.63■□□□□ 0.89
DffbO54788 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
DffbO54788 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
DffbO54788 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
DffbO54788 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
DffbO54788 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
DffbO54788 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
DffbO54788 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
DffbO54788 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.58■□□□□ 0.89
DffbO54788 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
DffbO54788 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
DffbO54788 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
DffbO54788 Gm16148-201ENSMUST00000119653 893 ntBASIC20.57■□□□□ 0.88
DffbO54788 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DffbO54788 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
DffbO54788 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
DffbO54788 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DffbO54788 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.56■□□□□ 0.88
DffbO54788 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
DffbO54788 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DffbO54788 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
DffbO54788 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.56■□□□□ 0.88
DffbO54788 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
DffbO54788 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DffbO54788 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
DffbO54788 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
DffbO54788 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
DffbO54788 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
DffbO54788 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
DffbO54788 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
DffbO54788 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DffbO54788 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DffbO54788 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DffbO54788 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
DffbO54788 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.52■□□□□ 0.88
DffbO54788 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DffbO54788 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
DffbO54788 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DffbO54788 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
DffbO54788 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DffbO54788 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DffbO54788 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.5■□□□□ 0.87
DffbO54788 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
DffbO54788 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
DffbO54788 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DffbO54788 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DffbO54788 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DffbO54788 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.48■□□□□ 0.87
DffbO54788 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DffbO54788 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DffbO54788 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
DffbO54788 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
DffbO54788 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
DffbO54788 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
DffbO54788 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.45■□□□□ 0.86
DffbO54788 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
DffbO54788 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
DffbO54788 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.45■□□□□ 0.86
DffbO54788 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
DffbO54788 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
DffbO54788 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
DffbO54788 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
DffbO54788 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
DffbO54788 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
DffbO54788 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
DffbO54788 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
DffbO54788 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
DffbO54788 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
DffbO54788 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
DffbO54788 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.4■□□□□ 0.86
DffbO54788 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
DffbO54788 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DffbO54788 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms