Protein–RNA interactions for Protein: O35089

Cnih2, Protein cornichon homolog 2, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnih2O35089 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cnih2O35089 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Cnih2O35089 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cnih2O35089 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Cnih2O35089 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Cnih2O35089 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Cnih2O35089 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.3■■□□□ 1
Cnih2O35089 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cnih2O35089 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cnih2O35089 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.27■■□□□ 1
Cnih2O35089 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.27■■□□□ 1
Cnih2O35089 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cnih2O35089 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Cnih2O35089 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cnih2O35089 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cnih2O35089 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cnih2O35089 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cnih2O35089 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cnih2O35089 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cnih2O35089 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cnih2O35089 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cnih2O35089 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cnih2O35089 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC21.24■□□□□ 0.99
Cnih2O35089 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cnih2O35089 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cnih2O35089 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
Cnih2O35089 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Cnih2O35089 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cnih2O35089 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Cnih2O35089 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cnih2O35089 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cnih2O35089 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cnih2O35089 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.21■□□□□ 0.99
Cnih2O35089 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cnih2O35089 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cnih2O35089 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.2■□□□□ 0.98
Cnih2O35089 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cnih2O35089 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cnih2O35089 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Cnih2O35089 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Cnih2O35089 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
Cnih2O35089 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cnih2O35089 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cnih2O35089 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cnih2O35089 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cnih2O35089 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cnih2O35089 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.15■□□□□ 0.98
Cnih2O35089 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cnih2O35089 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cnih2O35089 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cnih2O35089 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cnih2O35089 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cnih2O35089 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cnih2O35089 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cnih2O35089 Gm27322-201ENSMUST00000184007 104 ntBASIC21.12■□□□□ 0.97
Cnih2O35089 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cnih2O35089 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cnih2O35089 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Cnih2O35089 Gm17082-201ENSMUST00000166043 1091 ntBASIC21.11■□□□□ 0.97
Cnih2O35089 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Cnih2O35089 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cnih2O35089 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cnih2O35089 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cnih2O35089 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC21.1■□□□□ 0.97
Cnih2O35089 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.1■□□□□ 0.97
Cnih2O35089 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cnih2O35089 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Cnih2O35089 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cnih2O35089 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cnih2O35089 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.08■□□□□ 0.97
Cnih2O35089 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cnih2O35089 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cnih2O35089 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cnih2O35089 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cnih2O35089 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Cnih2O35089 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.06■□□□□ 0.96
Cnih2O35089 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Cnih2O35089 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cnih2O35089 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Cnih2O35089 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Cnih2O35089 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cnih2O35089 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.04■□□□□ 0.96
Cnih2O35089 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cnih2O35089 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.03■□□□□ 0.96
Cnih2O35089 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cnih2O35089 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.02■□□□□ 0.96
Cnih2O35089 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cnih2O35089 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Cnih2O35089 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cnih2O35089 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cnih2O35089 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cnih2O35089 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cnih2O35089 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cnih2O35089 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cnih2O35089 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cnih2O35089 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cnih2O35089 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.99■□□□□ 0.95
Cnih2O35089 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.99■□□□□ 0.95
Cnih2O35089 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cnih2O35089 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms