Protein–RNA interactions for Protein: O09111

Ndufb11, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial, mousemouse

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb11O09111 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ndufb11O09111 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ndufb11O09111 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Ndufb11O09111 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ndufb11O09111 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.53■□□□□ 0.72
Ndufb11O09111 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC19.53■□□□□ 0.72
Ndufb11O09111 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Ndufb11O09111 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ndufb11O09111 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Ndufb11O09111 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ndufb11O09111 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ndufb11O09111 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ndufb11O09111 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ndufb11O09111 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ndufb11O09111 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.49■□□□□ 0.71
Ndufb11O09111 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ndufb11O09111 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ndufb11O09111 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.48■□□□□ 0.71
Ndufb11O09111 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ndufb11O09111 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ndufb11O09111 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ndufb11O09111 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
Ndufb11O09111 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.47■□□□□ 0.71
Ndufb11O09111 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ndufb11O09111 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ndufb11O09111 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ndufb11O09111 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Ndufb11O09111 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ndufb11O09111 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Ndufb11O09111 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Ndufb11O09111 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ndufb11O09111 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.44■□□□□ 0.7
Ndufb11O09111 Mipep-204ENSMUST00000225043 1548 ntBASIC19.44■□□□□ 0.7
Ndufb11O09111 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ndufb11O09111 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.43■□□□□ 0.7
Ndufb11O09111 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ndufb11O09111 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.42■□□□□ 0.7
Ndufb11O09111 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ndufb11O09111 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ndufb11O09111 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ndufb11O09111 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Ndufb11O09111 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Ndufb11O09111 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ndufb11O09111 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ndufb11O09111 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ndufb11O09111 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ndufb11O09111 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ndufb11O09111 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ndufb11O09111 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ndufb11O09111 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Ndufb11O09111 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ndufb11O09111 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Ndufb11O09111 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
Ndufb11O09111 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ndufb11O09111 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Ndufb11O09111 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ndufb11O09111 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ndufb11O09111 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ndufb11O09111 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ndufb11O09111 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Ndufb11O09111 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ndufb11O09111 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ndufb11O09111 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ndufb11O09111 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ndufb11O09111 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ndufb11O09111 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ndufb11O09111 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ndufb11O09111 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Ndufb11O09111 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.33■□□□□ 0.69
Ndufb11O09111 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ndufb11O09111 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ndufb11O09111 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Ndufb11O09111 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ndufb11O09111 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Ndufb11O09111 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Ndufb11O09111 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ndufb11O09111 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Ndufb11O09111 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ndufb11O09111 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ndufb11O09111 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.31■□□□□ 0.68
Ndufb11O09111 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ndufb11O09111 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ndufb11O09111 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ndufb11O09111 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ndufb11O09111 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ndufb11O09111 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ndufb11O09111 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ndufb11O09111 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
Ndufb11O09111 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ndufb11O09111 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.29■□□□□ 0.68
Ndufb11O09111 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Ndufb11O09111 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ndufb11O09111 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Ndufb11O09111 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Ndufb11O09111 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ndufb11O09111 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ndufb11O09111 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ndufb11O09111 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ndufb11O09111 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.26■□□□□ 0.67
Ndufb11O09111 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms