Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdh1F7BJK1 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdh1F7BJK1 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.85■■□□□ 1.09
Pcdh1F7BJK1 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdh1F7BJK1 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdh1F7BJK1 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Pcdh1F7BJK1 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdh1F7BJK1 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdh1F7BJK1 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdh1F7BJK1 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Pcdh1F7BJK1 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.83■■□□□ 1.08
Pcdh1F7BJK1 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdh1F7BJK1 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.82■■□□□ 1.08
Pcdh1F7BJK1 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC21.82■■□□□ 1.08
Pcdh1F7BJK1 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdh1F7BJK1 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdh1F7BJK1 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Pcdh1F7BJK1 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.81■■□□□ 1.08
Pcdh1F7BJK1 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdh1F7BJK1 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdh1F7BJK1 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdh1F7BJK1 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.8■■□□□ 1.08
Pcdh1F7BJK1 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdh1F7BJK1 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Pcdh1F7BJK1 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdh1F7BJK1 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Pcdh1F7BJK1 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdh1F7BJK1 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Pcdh1F7BJK1 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Pcdh1F7BJK1 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdh1F7BJK1 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdh1F7BJK1 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.76■■□□□ 1.07
Pcdh1F7BJK1 Gm24804-201ENSMUST00000174982 85 ntBASIC21.76■■□□□ 1.07
Pcdh1F7BJK1 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdh1F7BJK1 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdh1F7BJK1 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdh1F7BJK1 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdh1F7BJK1 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.75■■□□□ 1.07
Pcdh1F7BJK1 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdh1F7BJK1 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdh1F7BJK1 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdh1F7BJK1 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdh1F7BJK1 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdh1F7BJK1 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdh1F7BJK1 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdh1F7BJK1 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.07
Pcdh1F7BJK1 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdh1F7BJK1 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdh1F7BJK1 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdh1F7BJK1 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Pcdh1F7BJK1 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdh1F7BJK1 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdh1F7BJK1 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdh1F7BJK1 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdh1F7BJK1 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.67■■□□□ 1.06
Pcdh1F7BJK1 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
Pcdh1F7BJK1 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdh1F7BJK1 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdh1F7BJK1 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.65■■□□□ 1.06
Pcdh1F7BJK1 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdh1F7BJK1 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
Pcdh1F7BJK1 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pcdh1F7BJK1 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdh1F7BJK1 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdh1F7BJK1 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdh1F7BJK1 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdh1F7BJK1 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdh1F7BJK1 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdh1F7BJK1 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdh1F7BJK1 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdh1F7BJK1 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdh1F7BJK1 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdh1F7BJK1 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdh1F7BJK1 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdh1F7BJK1 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdh1F7BJK1 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.59■■□□□ 1.05
Pcdh1F7BJK1 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdh1F7BJK1 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdh1F7BJK1 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdh1F7BJK1 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdh1F7BJK1 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdh1F7BJK1 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Pcdh1F7BJK1 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdh1F7BJK1 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdh1F7BJK1 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdh1F7BJK1 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdh1F7BJK1 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.53■■□□□ 1.04
Pcdh1F7BJK1 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdh1F7BJK1 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdh1F7BJK1 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Pcdh1F7BJK1 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdh1F7BJK1 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdh1F7BJK1 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdh1F7BJK1 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.51■■□□□ 1.03
Pcdh1F7BJK1 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdh1F7BJK1 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdh1F7BJK1 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdh1F7BJK1 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdh1F7BJK1 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdh1F7BJK1 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 7.8 ms