Protein–RNA interactions for Protein: F6RGA8

C530025M09Rik, RIKEN cDNA C530025M09 gene, mousemouse

Predictions only

Length 229 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C530025M09RikF6RGA8 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
C530025M09RikF6RGA8 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
C530025M09RikF6RGA8 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
C530025M09RikF6RGA8 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
C530025M09RikF6RGA8 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC16■□□□□ 0.15
C530025M09RikF6RGA8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC16■□□□□ 0.15
C530025M09RikF6RGA8 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
C530025M09RikF6RGA8 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
C530025M09RikF6RGA8 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
C530025M09RikF6RGA8 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
C530025M09RikF6RGA8 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
C530025M09RikF6RGA8 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
C530025M09RikF6RGA8 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
C530025M09RikF6RGA8 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
C530025M09RikF6RGA8 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
C530025M09RikF6RGA8 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
C530025M09RikF6RGA8 Pcf11-205ENSMUST00000208255 1720 ntBASIC15.97■□□□□ 0.15
C530025M09RikF6RGA8 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
C530025M09RikF6RGA8 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
C530025M09RikF6RGA8 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
C530025M09RikF6RGA8 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
C530025M09RikF6RGA8 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC15.96■□□□□ 0.15
C530025M09RikF6RGA8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC15.96■□□□□ 0.15
C530025M09RikF6RGA8 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
C530025M09RikF6RGA8 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
C530025M09RikF6RGA8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
C530025M09RikF6RGA8 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
C530025M09RikF6RGA8 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
C530025M09RikF6RGA8 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
C530025M09RikF6RGA8 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC15.94■□□□□ 0.14
C530025M09RikF6RGA8 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
C530025M09RikF6RGA8 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
C530025M09RikF6RGA8 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
C530025M09RikF6RGA8 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
C530025M09RikF6RGA8 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
C530025M09RikF6RGA8 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
C530025M09RikF6RGA8 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
C530025M09RikF6RGA8 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC15.92■□□□□ 0.14
C530025M09RikF6RGA8 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
C530025M09RikF6RGA8 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
C530025M09RikF6RGA8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
C530025M09RikF6RGA8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC15.91■□□□□ 0.14
C530025M09RikF6RGA8 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
C530025M09RikF6RGA8 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
C530025M09RikF6RGA8 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC15.91■□□□□ 0.14
C530025M09RikF6RGA8 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
C530025M09RikF6RGA8 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
C530025M09RikF6RGA8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
C530025M09RikF6RGA8 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
C530025M09RikF6RGA8 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
C530025M09RikF6RGA8 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
C530025M09RikF6RGA8 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
C530025M09RikF6RGA8 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
C530025M09RikF6RGA8 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
C530025M09RikF6RGA8 Gm24804-201ENSMUST00000174982 85 ntBASIC15.9■□□□□ 0.14
C530025M09RikF6RGA8 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
C530025M09RikF6RGA8 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
C530025M09RikF6RGA8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
C530025M09RikF6RGA8 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
C530025M09RikF6RGA8 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
C530025M09RikF6RGA8 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
C530025M09RikF6RGA8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
C530025M09RikF6RGA8 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
C530025M09RikF6RGA8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
C530025M09RikF6RGA8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC15.87■□□□□ 0.13
C530025M09RikF6RGA8 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
C530025M09RikF6RGA8 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
C530025M09RikF6RGA8 Gm16148-201ENSMUST00000119653 893 ntBASIC15.85■□□□□ 0.13
C530025M09RikF6RGA8 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
C530025M09RikF6RGA8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
C530025M09RikF6RGA8 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC15.84■□□□□ 0.13
C530025M09RikF6RGA8 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC15.84■□□□□ 0.13
C530025M09RikF6RGA8 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
C530025M09RikF6RGA8 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
C530025M09RikF6RGA8 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
C530025M09RikF6RGA8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
C530025M09RikF6RGA8 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
C530025M09RikF6RGA8 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
C530025M09RikF6RGA8 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
C530025M09RikF6RGA8 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
C530025M09RikF6RGA8 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
C530025M09RikF6RGA8 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
C530025M09RikF6RGA8 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
C530025M09RikF6RGA8 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
C530025M09RikF6RGA8 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
C530025M09RikF6RGA8 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
C530025M09RikF6RGA8 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
C530025M09RikF6RGA8 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
C530025M09RikF6RGA8 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
C530025M09RikF6RGA8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
C530025M09RikF6RGA8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
C530025M09RikF6RGA8 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
C530025M09RikF6RGA8 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
C530025M09RikF6RGA8 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
C530025M09RikF6RGA8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
C530025M09RikF6RGA8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC15.76■□□□□ 0.11
C530025M09RikF6RGA8 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
C530025M09RikF6RGA8 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
C530025M09RikF6RGA8 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
C530025M09RikF6RGA8 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms