Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Herc1E9PZP8 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Herc1E9PZP8 AC167019.3-201ENSMUST00000228225 1266 ntBASIC14.69□□□□□ -0.06
Herc1E9PZP8 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Herc1E9PZP8 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC14.69□□□□□ -0.06
Herc1E9PZP8 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC14.68□□□□□ -0.06
Herc1E9PZP8 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC14.68□□□□□ -0.06
Herc1E9PZP8 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Herc1E9PZP8 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC14.68□□□□□ -0.06
Herc1E9PZP8 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Herc1E9PZP8 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC14.67□□□□□ -0.06
Herc1E9PZP8 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC14.67□□□□□ -0.06
Herc1E9PZP8 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Herc1E9PZP8 Gm15820-201ENSMUST00000201566 728 ntBASIC14.66□□□□□ -0.06
Herc1E9PZP8 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Herc1E9PZP8 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Herc1E9PZP8 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC14.66□□□□□ -0.06
Herc1E9PZP8 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Herc1E9PZP8 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Herc1E9PZP8 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Herc1E9PZP8 AC093043.1-201ENSMUST00000226700 898 ntBASIC14.64□□□□□ -0.07
Herc1E9PZP8 Gm15546-201ENSMUST00000122095 826 ntBASIC14.63□□□□□ -0.07
Herc1E9PZP8 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Herc1E9PZP8 Scarna2-201ENSMUST00000157560 414 ntBASIC14.63□□□□□ -0.07
Herc1E9PZP8 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC14.63□□□□□ -0.07
Herc1E9PZP8 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Herc1E9PZP8 Gm9806-201ENSMUST00000051080 552 ntBASIC14.62□□□□□ -0.07
Herc1E9PZP8 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC14.61□□□□□ -0.07
Herc1E9PZP8 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Herc1E9PZP8 Gm7332-201ENSMUST00000118351 454 ntBASIC14.6□□□□□ -0.07
Herc1E9PZP8 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC14.6□□□□□ -0.07
Herc1E9PZP8 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Herc1E9PZP8 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC14.59□□□□□ -0.07
Herc1E9PZP8 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Herc1E9PZP8 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Herc1E9PZP8 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Herc1E9PZP8 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Herc1E9PZP8 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Herc1E9PZP8 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Herc1E9PZP8 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Herc1E9PZP8 Gm11687-201ENSMUST00000118911 886 ntBASIC14.56□□□□□ -0.08
Herc1E9PZP8 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Herc1E9PZP8 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC14.56□□□□□ -0.08
Herc1E9PZP8 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Herc1E9PZP8 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Herc1E9PZP8 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC14.55□□□□□ -0.08
Herc1E9PZP8 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Herc1E9PZP8 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Herc1E9PZP8 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Herc1E9PZP8 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC14.54□□□□□ -0.08
Herc1E9PZP8 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Herc1E9PZP8 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Herc1E9PZP8 Gm6345-201ENSMUST00000180378 1691 ntBASIC14.53□□□□□ -0.08
Herc1E9PZP8 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Herc1E9PZP8 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Herc1E9PZP8 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC14.52□□□□□ -0.08
Herc1E9PZP8 AC131739.1-201ENSMUST00000221692 1245 ntBASIC14.52□□□□□ -0.08
Herc1E9PZP8 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Herc1E9PZP8 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Herc1E9PZP8 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Herc1E9PZP8 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Herc1E9PZP8 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Herc1E9PZP8 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
Herc1E9PZP8 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Herc1E9PZP8 AC153911.1-201ENSMUST00000220378 758 ntBASIC14.49□□□□□ -0.09
Herc1E9PZP8 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Herc1E9PZP8 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Herc1E9PZP8 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC14.49□□□□□ -0.09
Herc1E9PZP8 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Herc1E9PZP8 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Herc1E9PZP8 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Herc1E9PZP8 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC14.48□□□□□ -0.09
Herc1E9PZP8 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Herc1E9PZP8 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Herc1E9PZP8 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Herc1E9PZP8 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Herc1E9PZP8 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Herc1E9PZP8 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC14.46□□□□□ -0.09
Herc1E9PZP8 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Herc1E9PZP8 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Herc1E9PZP8 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC14.46□□□□□ -0.09
Herc1E9PZP8 Slc35b2-207ENSMUST00000226086 850 ntBASIC14.46□□□□□ -0.09
Herc1E9PZP8 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Herc1E9PZP8 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Herc1E9PZP8 Gm16437-201ENSMUST00000025669 507 ntBASIC14.46□□□□□ -0.1
Herc1E9PZP8 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Herc1E9PZP8 Gm5921-201ENSMUST00000075898 882 ntBASIC14.44□□□□□ -0.1
Herc1E9PZP8 Gm14523-201ENSMUST00000117260 558 ntBASIC14.44□□□□□ -0.1
Herc1E9PZP8 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Herc1E9PZP8 Gm27502-201ENSMUST00000183495 199 ntBASIC14.43□□□□□ -0.1
Herc1E9PZP8 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC14.43□□□□□ -0.1
Herc1E9PZP8 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Herc1E9PZP8 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Herc1E9PZP8 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Herc1E9PZP8 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Herc1E9PZP8 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Herc1E9PZP8 Gm5067-201ENSMUST00000170449 1009 ntBASIC14.42□□□□□ -0.1
Herc1E9PZP8 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Herc1E9PZP8 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Herc1E9PZP8 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms