Protein–RNA interactions for Protein: D3YXG0

Hmcn1, Hemicentin-1, mousemouse

Predictions only

Length 5,634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmcn1D3YXG0 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Hmcn1D3YXG0 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Hmcn1D3YXG0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Hmcn1D3YXG0 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Hmcn1D3YXG0 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Hmcn1D3YXG0 AC167019.3-201ENSMUST00000228225 1266 ntBASIC7.49□□□□□ -1.21
Hmcn1D3YXG0 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Hmcn1D3YXG0 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC7.49□□□□□ -1.21
Hmcn1D3YXG0 Gm9806-201ENSMUST00000051080 552 ntBASIC7.49□□□□□ -1.21
Hmcn1D3YXG0 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC7.48□□□□□ -1.21
Hmcn1D3YXG0 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC7.48□□□□□ -1.21
Hmcn1D3YXG0 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Hmcn1D3YXG0 Scarna2-201ENSMUST00000157560 414 ntBASIC7.48□□□□□ -1.21
Hmcn1D3YXG0 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Hmcn1D3YXG0 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Hmcn1D3YXG0 Serp2-204ENSMUST00000228055 705 ntBASIC7.48□□□□□ -1.21
Hmcn1D3YXG0 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Hmcn1D3YXG0 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Hmcn1D3YXG0 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Hmcn1D3YXG0 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Hmcn1D3YXG0 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Hmcn1D3YXG0 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Hmcn1D3YXG0 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC7.47□□□□□ -1.21
Hmcn1D3YXG0 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Hmcn1D3YXG0 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Hmcn1D3YXG0 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Hmcn1D3YXG0 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
Hmcn1D3YXG0 Gm11687-201ENSMUST00000118911 886 ntBASIC7.46□□□□□ -1.22
Hmcn1D3YXG0 AC131739.1-201ENSMUST00000221692 1245 ntBASIC7.46□□□□□ -1.22
Hmcn1D3YXG0 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC7.45□□□□□ -1.22
Hmcn1D3YXG0 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Hmcn1D3YXG0 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC7.45□□□□□ -1.22
Hmcn1D3YXG0 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC7.45□□□□□ -1.22
Hmcn1D3YXG0 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC7.45□□□□□ -1.22
Hmcn1D3YXG0 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Hmcn1D3YXG0 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Hmcn1D3YXG0 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC7.44□□□□□ -1.22
Hmcn1D3YXG0 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Hmcn1D3YXG0 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC7.44□□□□□ -1.22
Hmcn1D3YXG0 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC7.44□□□□□ -1.22
Hmcn1D3YXG0 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Hmcn1D3YXG0 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Hmcn1D3YXG0 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC7.44□□□□□ -1.22
Hmcn1D3YXG0 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC7.44□□□□□ -1.22
Hmcn1D3YXG0 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Hmcn1D3YXG0 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC7.43□□□□□ -1.22
Hmcn1D3YXG0 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC7.43□□□□□ -1.22
Hmcn1D3YXG0 Gm6345-201ENSMUST00000180378 1691 ntBASIC7.43□□□□□ -1.22
Hmcn1D3YXG0 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Hmcn1D3YXG0 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC7.42□□□□□ -1.22
Hmcn1D3YXG0 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Hmcn1D3YXG0 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Hmcn1D3YXG0 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Hmcn1D3YXG0 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Hmcn1D3YXG0 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC7.42□□□□□ -1.22
Hmcn1D3YXG0 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC7.42□□□□□ -1.22
Hmcn1D3YXG0 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Hmcn1D3YXG0 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC7.41□□□□□ -1.22
Hmcn1D3YXG0 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC7.41□□□□□ -1.22
Hmcn1D3YXG0 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Hmcn1D3YXG0 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC7.41□□□□□ -1.22
Hmcn1D3YXG0 Gm15820-201ENSMUST00000201566 728 ntBASIC7.41□□□□□ -1.22
Hmcn1D3YXG0 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Hmcn1D3YXG0 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Hmcn1D3YXG0 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC7.41□□□□□ -1.22
Hmcn1D3YXG0 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC7.41□□□□□ -1.22
Hmcn1D3YXG0 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Hmcn1D3YXG0 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Hmcn1D3YXG0 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Hmcn1D3YXG0 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Hmcn1D3YXG0 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC7.4□□□□□ -1.23
Hmcn1D3YXG0 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC7.4□□□□□ -1.23
Hmcn1D3YXG0 Gm15546-201ENSMUST00000122095 826 ntBASIC7.4□□□□□ -1.23
Hmcn1D3YXG0 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Hmcn1D3YXG0 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC7.39□□□□□ -1.23
Hmcn1D3YXG0 Gm7332-201ENSMUST00000118351 454 ntBASIC7.39□□□□□ -1.23
Hmcn1D3YXG0 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Hmcn1D3YXG0 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
Hmcn1D3YXG0 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC7.38□□□□□ -1.23
Hmcn1D3YXG0 AC093043.1-201ENSMUST00000226700 898 ntBASIC7.38□□□□□ -1.23
Hmcn1D3YXG0 Gm5067-201ENSMUST00000170449 1009 ntBASIC7.38□□□□□ -1.23
Hmcn1D3YXG0 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Hmcn1D3YXG0 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
Hmcn1D3YXG0 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC7.38□□□□□ -1.23
Hmcn1D3YXG0 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Hmcn1D3YXG0 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Hmcn1D3YXG0 Gm14523-201ENSMUST00000117260 558 ntBASIC7.37□□□□□ -1.23
Hmcn1D3YXG0 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
Hmcn1D3YXG0 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Hmcn1D3YXG0 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Hmcn1D3YXG0 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC7.37□□□□□ -1.23
Hmcn1D3YXG0 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Hmcn1D3YXG0 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Hmcn1D3YXG0 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Hmcn1D3YXG0 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Hmcn1D3YXG0 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Hmcn1D3YXG0 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Hmcn1D3YXG0 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Hmcn1D3YXG0 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Hmcn1D3YXG0 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms