Protein–RNA interactions for Protein: B1AUC4

Ube2u, Ubiquitin-conjugating enzyme E2U (putative), mousemouse

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2uB1AUC4 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC36.25■■■■□ 3.39
Ube2uB1AUC4 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC36.25■■■■□ 3.39
Ube2uB1AUC4 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC36.24■■■■□ 3.39
Ube2uB1AUC4 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC36.24■■■■□ 3.39
Ube2uB1AUC4 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC36.24■■■■□ 3.39
Ube2uB1AUC4 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC36.23■■■■□ 3.39
Ube2uB1AUC4 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC36.22■■■■□ 3.39
Ube2uB1AUC4 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC36.2■■■■□ 3.39
Ube2uB1AUC4 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC36.2■■■■□ 3.39
Ube2uB1AUC4 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC36.2■■■■□ 3.39
Ube2uB1AUC4 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC36.2■■■■□ 3.39
Ube2uB1AUC4 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC36.18■■■■□ 3.38
Ube2uB1AUC4 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC36.18■■■■□ 3.38
Ube2uB1AUC4 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC36.15■■■■□ 3.38
Ube2uB1AUC4 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC36.15■■■■□ 3.38
Ube2uB1AUC4 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC36.15■■■■□ 3.38
Ube2uB1AUC4 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC36.12■■■■□ 3.37
Ube2uB1AUC4 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC36.12■■■■□ 3.37
Ube2uB1AUC4 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC36.11■■■■□ 3.37
Ube2uB1AUC4 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC36.11■■■■□ 3.37
Ube2uB1AUC4 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC36.11■■■■□ 3.37
Ube2uB1AUC4 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC36.11■■■■□ 3.37
Ube2uB1AUC4 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC36.1■■■■□ 3.37
Ube2uB1AUC4 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC36.1■■■■□ 3.37
Ube2uB1AUC4 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC36.1■■■■□ 3.37
Ube2uB1AUC4 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC36.09■■■■□ 3.37
Ube2uB1AUC4 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC36.08■■■■□ 3.37
Ube2uB1AUC4 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC36.08■■■■□ 3.37
Ube2uB1AUC4 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC36.07■■■■□ 3.36
Ube2uB1AUC4 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC36.07■■■■□ 3.36
Ube2uB1AUC4 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC36.05■■■■□ 3.36
Ube2uB1AUC4 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC36.05■■■■□ 3.36
Ube2uB1AUC4 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC36.02■■■■□ 3.36
Ube2uB1AUC4 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC36.02■■■■□ 3.36
Ube2uB1AUC4 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC36■■■■□ 3.35
Ube2uB1AUC4 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC35.99■■■■□ 3.35
Ube2uB1AUC4 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC35.98■■■■□ 3.35
Ube2uB1AUC4 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC35.98■■■■□ 3.35
Ube2uB1AUC4 Gm5987-201ENSMUST00000196433 1151 ntBASIC35.98■■■■□ 3.35
Ube2uB1AUC4 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC35.98■■■■□ 3.35
Ube2uB1AUC4 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC35.97■■■■□ 3.35
Ube2uB1AUC4 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC35.97■■■■□ 3.35
Ube2uB1AUC4 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC35.96■■■■□ 3.35
Ube2uB1AUC4 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC35.95■■■■□ 3.35
Ube2uB1AUC4 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC35.94■■■■□ 3.34
Ube2uB1AUC4 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC35.93■■■■□ 3.34
Ube2uB1AUC4 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC35.93■■■■□ 3.34
Ube2uB1AUC4 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC35.93■■■■□ 3.34
Ube2uB1AUC4 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC35.92■■■■□ 3.34
Ube2uB1AUC4 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC35.91■■■■□ 3.34
Ube2uB1AUC4 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC35.91■■■■□ 3.34
Ube2uB1AUC4 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC35.91■■■■□ 3.34
Ube2uB1AUC4 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC35.9■■■■□ 3.34
Ube2uB1AUC4 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC35.9■■■■□ 3.34
Ube2uB1AUC4 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC35.9■■■■□ 3.34
Ube2uB1AUC4 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC35.9■■■■□ 3.34
Ube2uB1AUC4 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC35.9■■■■□ 3.34
Ube2uB1AUC4 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC35.88■■■■□ 3.34
Ube2uB1AUC4 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC35.88■■■■□ 3.33
Ube2uB1AUC4 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC35.88■■■■□ 3.33
Ube2uB1AUC4 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC35.87■■■■□ 3.33
Ube2uB1AUC4 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC35.87■■■■□ 3.33
Ube2uB1AUC4 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC35.87■■■■□ 3.33
Ube2uB1AUC4 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC35.87■■■■□ 3.33
Ube2uB1AUC4 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC35.86■■■■□ 3.33
Ube2uB1AUC4 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC35.86■■■■□ 3.33
Ube2uB1AUC4 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC35.84■■■■□ 3.33
Ube2uB1AUC4 Zxda-201ENSMUST00000117281 2621 ntBASIC35.83■■■■□ 3.33
Ube2uB1AUC4 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC35.82■■■■□ 3.32
Ube2uB1AUC4 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC35.82■■■■□ 3.32
Ube2uB1AUC4 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC35.81■■■■□ 3.32
Ube2uB1AUC4 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC35.8■■■■□ 3.32
Ube2uB1AUC4 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
Ube2uB1AUC4 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC35.8■■■■□ 3.32
Ube2uB1AUC4 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC35.8■■■■□ 3.32
Ube2uB1AUC4 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC35.8■■■■□ 3.32
Ube2uB1AUC4 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC35.79■■■■□ 3.32
Ube2uB1AUC4 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC35.79■■■■□ 3.32
Ube2uB1AUC4 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC35.79■■■■□ 3.32
Ube2uB1AUC4 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC35.78■■■■□ 3.32
Ube2uB1AUC4 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC35.77■■■■□ 3.32
Ube2uB1AUC4 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC35.77■■■■□ 3.32
Ube2uB1AUC4 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC35.75■■■■□ 3.31
Ube2uB1AUC4 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC35.75■■■■□ 3.31
Ube2uB1AUC4 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC35.74■■■■□ 3.31
Ube2uB1AUC4 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC35.73■■■■□ 3.31
Ube2uB1AUC4 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC35.73■■■■□ 3.31
Ube2uB1AUC4 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC35.73■■■■□ 3.31
Ube2uB1AUC4 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC35.72■■■■□ 3.31
Ube2uB1AUC4 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC35.72■■■■□ 3.31
Ube2uB1AUC4 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC35.72■■■■□ 3.31
Ube2uB1AUC4 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC35.72■■■■□ 3.31
Ube2uB1AUC4 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC35.7■■■■□ 3.31
Ube2uB1AUC4 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC35.68■■■■□ 3.3
Ube2uB1AUC4 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC35.66■■■■□ 3.3
Ube2uB1AUC4 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC35.66■■■■□ 3.3
Ube2uB1AUC4 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC35.66■■■■□ 3.3
Ube2uB1AUC4 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
Ube2uB1AUC4 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC35.65■■■■□ 3.3
Ube2uB1AUC4 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC35.65■■■■□ 3.3
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms