Protein–RNA interactions for Protein: A2AT37

Upf2, UPF2 regulator of nonsense transcripts homolog (yeast), mousemouse

Known RBP Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf2A2AT37 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC31.69■■■□□ 2.66
Upf2A2AT37 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Upf2A2AT37 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC31.68■■■□□ 2.66
Upf2A2AT37 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Upf2A2AT37 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Upf2A2AT37 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC31.66■■■□□ 2.66
Upf2A2AT37 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC31.65■■■□□ 2.66
Upf2A2AT37 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
Upf2A2AT37 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
Upf2A2AT37 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Upf2A2AT37 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Upf2A2AT37 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
Upf2A2AT37 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
Upf2A2AT37 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC31.63■■■□□ 2.65
Upf2A2AT37 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC31.62■■■□□ 2.65
Upf2A2AT37 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC31.6■■■□□ 2.65
Upf2A2AT37 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
Upf2A2AT37 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC31.59■■■□□ 2.65
Upf2A2AT37 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
Upf2A2AT37 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Upf2A2AT37 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC31.58■■■□□ 2.65
Upf2A2AT37 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
Upf2A2AT37 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
Upf2A2AT37 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Upf2A2AT37 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
Upf2A2AT37 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Upf2A2AT37 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC31.52■■■□□ 2.64
Upf2A2AT37 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
Upf2A2AT37 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC31.51■■■□□ 2.64
Upf2A2AT37 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC31.51■■■□□ 2.64
Upf2A2AT37 Pcf11-205ENSMUST00000208255 1720 ntBASIC31.51■■■□□ 2.63
Upf2A2AT37 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC31.51■■■□□ 2.63
Upf2A2AT37 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC31.51■■■□□ 2.63
Upf2A2AT37 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Upf2A2AT37 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
Upf2A2AT37 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Upf2A2AT37 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Upf2A2AT37 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Upf2A2AT37 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Upf2A2AT37 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC31.48■■■□□ 2.63
Upf2A2AT37 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
Upf2A2AT37 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
Upf2A2AT37 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Upf2A2AT37 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
Upf2A2AT37 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Upf2A2AT37 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
Upf2A2AT37 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC31.45■■■□□ 2.62
Upf2A2AT37 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Upf2A2AT37 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Upf2A2AT37 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Upf2A2AT37 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC31.42■■■□□ 2.62
Upf2A2AT37 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC31.41■■■□□ 2.62
Upf2A2AT37 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Upf2A2AT37 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Upf2A2AT37 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC31.4■■■□□ 2.62
Upf2A2AT37 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC31.4■■■□□ 2.62
Upf2A2AT37 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC31.38■■■□□ 2.61
Upf2A2AT37 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC31.37■■■□□ 2.61
Upf2A2AT37 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Upf2A2AT37 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
Upf2A2AT37 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Upf2A2AT37 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Upf2A2AT37 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Upf2A2AT37 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC31.34■■■□□ 2.61
Upf2A2AT37 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Upf2A2AT37 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Upf2A2AT37 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Upf2A2AT37 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Upf2A2AT37 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC31.32■■■□□ 2.6
Upf2A2AT37 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Upf2A2AT37 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Upf2A2AT37 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Upf2A2AT37 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC31.29■■■□□ 2.6
Upf2A2AT37 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC31.29■■■□□ 2.6
Upf2A2AT37 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Upf2A2AT37 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Upf2A2AT37 AC153890.1-201ENSMUST00000220021 2469 ntBASIC31.25■■■□□ 2.59
Upf2A2AT37 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
Upf2A2AT37 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Upf2A2AT37 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Upf2A2AT37 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC31.23■■■□□ 2.59
Upf2A2AT37 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Upf2A2AT37 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Upf2A2AT37 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Upf2A2AT37 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
Upf2A2AT37 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
Upf2A2AT37 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
Upf2A2AT37 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC31.21■■■□□ 2.59
Upf2A2AT37 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Upf2A2AT37 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Upf2A2AT37 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Upf2A2AT37 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC31.2■■■□□ 2.59
Upf2A2AT37 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Upf2A2AT37 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Upf2A2AT37 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Upf2A2AT37 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Upf2A2AT37 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Upf2A2AT37 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC31.17■■■□□ 2.58
Upf2A2AT37 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Upf2A2AT37 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC31.16■■■□□ 2.58
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms