Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ubr4A2AN08 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ubr4A2AN08 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ubr4A2AN08 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC13.67□□□□□ -0.22
Ubr4A2AN08 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Ubr4A2AN08 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC13.66□□□□□ -0.22
Ubr4A2AN08 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC13.66□□□□□ -0.22
Ubr4A2AN08 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ubr4A2AN08 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ubr4A2AN08 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ubr4A2AN08 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ubr4A2AN08 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ubr4A2AN08 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC13.64□□□□□ -0.23
Ubr4A2AN08 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ubr4A2AN08 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ubr4A2AN08 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ubr4A2AN08 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Ubr4A2AN08 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ubr4A2AN08 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ubr4A2AN08 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ubr4A2AN08 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ubr4A2AN08 Gm15820-201ENSMUST00000201566 728 ntBASIC13.62□□□□□ -0.23
Ubr4A2AN08 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC13.61□□□□□ -0.23
Ubr4A2AN08 Gm9806-201ENSMUST00000051080 552 ntBASIC13.61□□□□□ -0.23
Ubr4A2AN08 Scarna2-201ENSMUST00000157560 414 ntBASIC13.61□□□□□ -0.23
Ubr4A2AN08 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ubr4A2AN08 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubr4A2AN08 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC13.6□□□□□ -0.23
Ubr4A2AN08 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubr4A2AN08 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ubr4A2AN08 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC13.6□□□□□ -0.23
Ubr4A2AN08 Gm11687-201ENSMUST00000118911 886 ntBASIC13.59□□□□□ -0.23
Ubr4A2AN08 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ubr4A2AN08 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ubr4A2AN08 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ubr4A2AN08 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC13.59□□□□□ -0.23
Ubr4A2AN08 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ubr4A2AN08 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ubr4A2AN08 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Ubr4A2AN08 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ubr4A2AN08 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ubr4A2AN08 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC13.57□□□□□ -0.24
Ubr4A2AN08 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ubr4A2AN08 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC13.57□□□□□ -0.24
Ubr4A2AN08 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Ubr4A2AN08 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC13.56□□□□□ -0.24
Ubr4A2AN08 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ubr4A2AN08 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ubr4A2AN08 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ubr4A2AN08 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ubr4A2AN08 Gm15546-201ENSMUST00000122095 826 ntBASIC13.54□□□□□ -0.24
Ubr4A2AN08 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC13.53□□□□□ -0.24
Ubr4A2AN08 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC13.53□□□□□ -0.24
Ubr4A2AN08 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Ubr4A2AN08 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Ubr4A2AN08 AC131739.1-201ENSMUST00000221692 1245 ntBASIC13.53□□□□□ -0.24
Ubr4A2AN08 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ubr4A2AN08 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ubr4A2AN08 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC13.52□□□□□ -0.24
Ubr4A2AN08 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ubr4A2AN08 Gm7332-201ENSMUST00000118351 454 ntBASIC13.52□□□□□ -0.25
Ubr4A2AN08 AC093043.1-201ENSMUST00000226700 898 ntBASIC13.52□□□□□ -0.25
Ubr4A2AN08 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Ubr4A2AN08 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ubr4A2AN08 Gm6345-201ENSMUST00000180378 1691 ntBASIC13.51□□□□□ -0.25
Ubr4A2AN08 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC13.51□□□□□ -0.25
Ubr4A2AN08 Gm27502-201ENSMUST00000183495 199 ntBASIC13.51□□□□□ -0.25
Ubr4A2AN08 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Ubr4A2AN08 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ubr4A2AN08 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC13.5□□□□□ -0.25
Ubr4A2AN08 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubr4A2AN08 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ubr4A2AN08 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ubr4A2AN08 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC13.49□□□□□ -0.25
Ubr4A2AN08 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ubr4A2AN08 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ubr4A2AN08 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC13.49□□□□□ -0.25
Ubr4A2AN08 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ubr4A2AN08 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ubr4A2AN08 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ubr4A2AN08 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ubr4A2AN08 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ubr4A2AN08 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ubr4A2AN08 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubr4A2AN08 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
Ubr4A2AN08 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ubr4A2AN08 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC13.46□□□□□ -0.25
Ubr4A2AN08 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ubr4A2AN08 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ubr4A2AN08 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ubr4A2AN08 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ubr4A2AN08 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ubr4A2AN08 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ubr4A2AN08 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ubr4A2AN08 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC13.44□□□□□ -0.26
Ubr4A2AN08 Gm14523-201ENSMUST00000117260 558 ntBASIC13.44□□□□□ -0.26
Ubr4A2AN08 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ubr4A2AN08 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC13.43□□□□□ -0.26
Ubr4A2AN08 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ubr4A2AN08 AC153911.1-201ENSMUST00000220378 758 ntBASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 9.5 ms