Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trbv29A0A0G2LB96 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trbv29A0A0G2LB96 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trbv29A0A0G2LB96 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trbv29A0A0G2LB96 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trbv29A0A0G2LB96 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trbv29A0A0G2LB96 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.13■□□□□ 0.81
Trbv29A0A0G2LB96 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.13■□□□□ 0.81
Trbv29A0A0G2LB96 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Trbv29A0A0G2LB96 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trbv29A0A0G2LB96 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trbv29A0A0G2LB96 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trbv29A0A0G2LB96 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trbv29A0A0G2LB96 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trbv29A0A0G2LB96 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.12■□□□□ 0.81
Trbv29A0A0G2LB96 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trbv29A0A0G2LB96 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trbv29A0A0G2LB96 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trbv29A0A0G2LB96 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trbv29A0A0G2LB96 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trbv29A0A0G2LB96 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.09■□□□□ 0.81
Trbv29A0A0G2LB96 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trbv29A0A0G2LB96 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trbv29A0A0G2LB96 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Trbv29A0A0G2LB96 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Trbv29A0A0G2LB96 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Trbv29A0A0G2LB96 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Trbv29A0A0G2LB96 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trbv29A0A0G2LB96 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trbv29A0A0G2LB96 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trbv29A0A0G2LB96 Gm24804-201ENSMUST00000174982 85 ntBASIC20.06■□□□□ 0.8
Trbv29A0A0G2LB96 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trbv29A0A0G2LB96 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.05■□□□□ 0.8
Trbv29A0A0G2LB96 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trbv29A0A0G2LB96 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trbv29A0A0G2LB96 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Trbv29A0A0G2LB96 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.04■□□□□ 0.8
Trbv29A0A0G2LB96 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trbv29A0A0G2LB96 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trbv29A0A0G2LB96 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trbv29A0A0G2LB96 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trbv29A0A0G2LB96 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trbv29A0A0G2LB96 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trbv29A0A0G2LB96 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.02■□□□□ 0.8
Trbv29A0A0G2LB96 Gm16148-201ENSMUST00000119653 893 ntBASIC20.02■□□□□ 0.8
Trbv29A0A0G2LB96 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trbv29A0A0G2LB96 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Trbv29A0A0G2LB96 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trbv29A0A0G2LB96 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trbv29A0A0G2LB96 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trbv29A0A0G2LB96 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trbv29A0A0G2LB96 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Trbv29A0A0G2LB96 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trbv29A0A0G2LB96 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Trbv29A0A0G2LB96 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trbv29A0A0G2LB96 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trbv29A0A0G2LB96 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Trbv29A0A0G2LB96 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20■□□□□ 0.79
Trbv29A0A0G2LB96 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trbv29A0A0G2LB96 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trbv29A0A0G2LB96 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.99■□□□□ 0.79
Trbv29A0A0G2LB96 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.99■□□□□ 0.79
Trbv29A0A0G2LB96 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trbv29A0A0G2LB96 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trbv29A0A0G2LB96 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trbv29A0A0G2LB96 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trbv29A0A0G2LB96 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trbv29A0A0G2LB96 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trbv29A0A0G2LB96 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trbv29A0A0G2LB96 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trbv29A0A0G2LB96 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trbv29A0A0G2LB96 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trbv29A0A0G2LB96 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trbv29A0A0G2LB96 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
Trbv29A0A0G2LB96 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Trbv29A0A0G2LB96 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trbv29A0A0G2LB96 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trbv29A0A0G2LB96 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trbv29A0A0G2LB96 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trbv29A0A0G2LB96 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trbv29A0A0G2LB96 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.9■□□□□ 0.78
Trbv29A0A0G2LB96 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Trbv29A0A0G2LB96 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trbv29A0A0G2LB96 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trbv29A0A0G2LB96 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.88■□□□□ 0.77
Trbv29A0A0G2LB96 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trbv29A0A0G2LB96 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trbv29A0A0G2LB96 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trbv29A0A0G2LB96 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trbv29A0A0G2LB96 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trbv29A0A0G2LB96 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trbv29A0A0G2LB96 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trbv29A0A0G2LB96 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trbv29A0A0G2LB96 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trbv29A0A0G2LB96 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trbv29A0A0G2LB96 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.86■□□□□ 0.77
Trbv29A0A0G2LB96 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trbv29A0A0G2LB96 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Trbv29A0A0G2LB96 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Trbv29A0A0G2LB96 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms