Protein–RNA interactions for Protein: A0A0G2JFC6

Igkv4-53, Immunoglobulin kappa variable 4-53 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-53A0A0G2JFC6 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC17.07■□□□□ 0.32
Igkv4-53A0A0G2JFC6 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Igkv4-53A0A0G2JFC6 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Igkv4-53A0A0G2JFC6 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Igkv4-53A0A0G2JFC6 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Igkv4-53A0A0G2JFC6 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC17.05■□□□□ 0.32
Igkv4-53A0A0G2JFC6 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Igkv4-53A0A0G2JFC6 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC17.05■□□□□ 0.32
Igkv4-53A0A0G2JFC6 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Igkv4-53A0A0G2JFC6 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Igkv4-53A0A0G2JFC6 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Igkv4-53A0A0G2JFC6 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC17.03■□□□□ 0.32
Igkv4-53A0A0G2JFC6 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Igkv4-53A0A0G2JFC6 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Igkv4-53A0A0G2JFC6 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Igkv4-53A0A0G2JFC6 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Igkv4-53A0A0G2JFC6 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Igkv4-53A0A0G2JFC6 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Igkv4-53A0A0G2JFC6 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Igkv4-53A0A0G2JFC6 Zfp131-205ENSMUST00000223812 663 ntBASIC17.01■□□□□ 0.31
Igkv4-53A0A0G2JFC6 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Igkv4-53A0A0G2JFC6 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Igkv4-53A0A0G2JFC6 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Igkv4-53A0A0G2JFC6 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Igkv4-53A0A0G2JFC6 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Igkv4-53A0A0G2JFC6 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC16.99■□□□□ 0.31
Igkv4-53A0A0G2JFC6 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Igkv4-53A0A0G2JFC6 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Igkv4-53A0A0G2JFC6 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Igkv4-53A0A0G2JFC6 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Igkv4-53A0A0G2JFC6 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Igkv4-53A0A0G2JFC6 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC16.97■□□□□ 0.31
Igkv4-53A0A0G2JFC6 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC16.97■□□□□ 0.31
Igkv4-53A0A0G2JFC6 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Igkv4-53A0A0G2JFC6 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Igkv4-53A0A0G2JFC6 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Igkv4-53A0A0G2JFC6 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Igkv4-53A0A0G2JFC6 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Igkv4-53A0A0G2JFC6 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Igkv4-53A0A0G2JFC6 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Igkv4-53A0A0G2JFC6 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Igkv4-53A0A0G2JFC6 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Igkv4-53A0A0G2JFC6 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Igkv4-53A0A0G2JFC6 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC16.94■□□□□ 0.3
Igkv4-53A0A0G2JFC6 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Igkv4-53A0A0G2JFC6 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Igkv4-53A0A0G2JFC6 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Igkv4-53A0A0G2JFC6 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Igkv4-53A0A0G2JFC6 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Igkv4-53A0A0G2JFC6 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Igkv4-53A0A0G2JFC6 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC16.93■□□□□ 0.3
Igkv4-53A0A0G2JFC6 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Igkv4-53A0A0G2JFC6 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC16.92■□□□□ 0.3
Igkv4-53A0A0G2JFC6 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC16.92■□□□□ 0.3
Igkv4-53A0A0G2JFC6 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Igkv4-53A0A0G2JFC6 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Igkv4-53A0A0G2JFC6 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Igkv4-53A0A0G2JFC6 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Igkv4-53A0A0G2JFC6 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Igkv4-53A0A0G2JFC6 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Igkv4-53A0A0G2JFC6 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Igkv4-53A0A0G2JFC6 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC16.89■□□□□ 0.29
Igkv4-53A0A0G2JFC6 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC16.88■□□□□ 0.29
Igkv4-53A0A0G2JFC6 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Igkv4-53A0A0G2JFC6 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Igkv4-53A0A0G2JFC6 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC16.88■□□□□ 0.29
Igkv4-53A0A0G2JFC6 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC16.88■□□□□ 0.29
Igkv4-53A0A0G2JFC6 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Igkv4-53A0A0G2JFC6 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Igkv4-53A0A0G2JFC6 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Igkv4-53A0A0G2JFC6 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Igkv4-53A0A0G2JFC6 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Igkv4-53A0A0G2JFC6 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Igkv4-53A0A0G2JFC6 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Igkv4-53A0A0G2JFC6 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Igkv4-53A0A0G2JFC6 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Igkv4-53A0A0G2JFC6 Tdp2-203ENSMUST00000223804 1136 ntBASIC16.86■□□□□ 0.29
Igkv4-53A0A0G2JFC6 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Igkv4-53A0A0G2JFC6 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Igkv4-53A0A0G2JFC6 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Igkv4-53A0A0G2JFC6 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Igkv4-53A0A0G2JFC6 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Igkv4-53A0A0G2JFC6 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Igkv4-53A0A0G2JFC6 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC16.85■□□□□ 0.29
Igkv4-53A0A0G2JFC6 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC16.85■□□□□ 0.29
Igkv4-53A0A0G2JFC6 Gm9397-201ENSMUST00000200125 605 ntBASIC16.85■□□□□ 0.29
Igkv4-53A0A0G2JFC6 Gm43863-201ENSMUST00000203822 1192 ntBASIC16.85■□□□□ 0.29
Igkv4-53A0A0G2JFC6 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC16.85■□□□□ 0.29
Igkv4-53A0A0G2JFC6 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Igkv4-53A0A0G2JFC6 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Igkv4-53A0A0G2JFC6 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Igkv4-53A0A0G2JFC6 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC16.84■□□□□ 0.29
Igkv4-53A0A0G2JFC6 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Igkv4-53A0A0G2JFC6 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Igkv4-53A0A0G2JFC6 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC16.83■□□□□ 0.28
Igkv4-53A0A0G2JFC6 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Igkv4-53A0A0G2JFC6 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Igkv4-53A0A0G2JFC6 Fezf2-202ENSMUST00000224023 1917 ntBASIC16.82■□□□□ 0.28
Igkv4-53A0A0G2JFC6 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Igkv4-53A0A0G2JFC6 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms