Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Igkv8-27A0A0G2JF28 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Igkv8-27A0A0G2JF28 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Igkv8-27A0A0G2JF28 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Igkv8-27A0A0G2JF28 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Igkv8-27A0A0G2JF28 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Igkv8-27A0A0G2JF28 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Igkv8-27A0A0G2JF28 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Igkv8-27A0A0G2JF28 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Igkv8-27A0A0G2JF28 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Igkv8-27A0A0G2JF28 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Igkv8-27A0A0G2JF28 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv8-27A0A0G2JF28 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv8-27A0A0G2JF28 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv8-27A0A0G2JF28 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv8-27A0A0G2JF28 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Igkv8-27A0A0G2JF28 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv8-27A0A0G2JF28 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv8-27A0A0G2JF28 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv8-27A0A0G2JF28 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC15.13■□□□□ 0.01
Igkv8-27A0A0G2JF28 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Igkv8-27A0A0G2JF28 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC15.13■□□□□ 0.01
Igkv8-27A0A0G2JF28 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Igkv8-27A0A0G2JF28 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Igkv8-27A0A0G2JF28 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Igkv8-27A0A0G2JF28 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Igkv8-27A0A0G2JF28 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Igkv8-27A0A0G2JF28 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Igkv8-27A0A0G2JF28 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Igkv8-27A0A0G2JF28 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Igkv8-27A0A0G2JF28 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Igkv8-27A0A0G2JF28 Gm30346-201ENSMUST00000218641 1699 ntBASIC15.12■□□□□ 0.01
Igkv8-27A0A0G2JF28 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC15.11■□□□□ 0.01
Igkv8-27A0A0G2JF28 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Igkv8-27A0A0G2JF28 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC15.11■□□□□ 0.01
Igkv8-27A0A0G2JF28 Gm17641-201ENSMUST00000166328 2350 ntBASIC15.11■□□□□ 0.01
Igkv8-27A0A0G2JF28 Il17rd-202ENSMUST00000223942 2186 ntBASIC15.1■□□□□ 0.01
Igkv8-27A0A0G2JF28 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC15.1■□□□□ 0.01
Igkv8-27A0A0G2JF28 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Igkv8-27A0A0G2JF28 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Igkv8-27A0A0G2JF28 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Igkv8-27A0A0G2JF28 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Igkv8-27A0A0G2JF28 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Igkv8-27A0A0G2JF28 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Igkv8-27A0A0G2JF28 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Igkv8-27A0A0G2JF28 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Igkv8-27A0A0G2JF28 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Igkv8-27A0A0G2JF28 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC15.07■□□□□ 0
Igkv8-27A0A0G2JF28 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Igkv8-27A0A0G2JF28 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC15.07■□□□□ 0
Igkv8-27A0A0G2JF28 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Igkv8-27A0A0G2JF28 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Igkv8-27A0A0G2JF28 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC15.06■□□□□ 0
Igkv8-27A0A0G2JF28 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC15.06■□□□□ 0
Igkv8-27A0A0G2JF28 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Igkv8-27A0A0G2JF28 Gm25238-201ENSMUST00000174914 89 ntBASIC15.06■□□□□ 0
Igkv8-27A0A0G2JF28 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Igkv8-27A0A0G2JF28 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Igkv8-27A0A0G2JF28 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Igkv8-27A0A0G2JF28 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Igkv8-27A0A0G2JF28 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Igkv8-27A0A0G2JF28 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Igkv8-27A0A0G2JF28 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC15.05■□□□□ -0
Igkv8-27A0A0G2JF28 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC15.05■□□□□ -0
Igkv8-27A0A0G2JF28 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Igkv8-27A0A0G2JF28 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC15.04■□□□□ -0
Igkv8-27A0A0G2JF28 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Igkv8-27A0A0G2JF28 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Igkv8-27A0A0G2JF28 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC15.04■□□□□ -0
Igkv8-27A0A0G2JF28 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Igkv8-27A0A0G2JF28 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Igkv8-27A0A0G2JF28 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC15.04■□□□□ -0
Igkv8-27A0A0G2JF28 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Igkv8-27A0A0G2JF28 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Igkv8-27A0A0G2JF28 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Igkv8-27A0A0G2JF28 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Igkv8-27A0A0G2JF28 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Igkv8-27A0A0G2JF28 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Igkv8-27A0A0G2JF28 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC15.03■□□□□ -0
Igkv8-27A0A0G2JF28 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Igkv8-27A0A0G2JF28 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Igkv8-27A0A0G2JF28 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC15.02■□□□□ -0
Igkv8-27A0A0G2JF28 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Igkv8-27A0A0G2JF28 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Igkv8-27A0A0G2JF28 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Igkv8-27A0A0G2JF28 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Igkv8-27A0A0G2JF28 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Igkv8-27A0A0G2JF28 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Igkv8-27A0A0G2JF28 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Igkv8-27A0A0G2JF28 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Igkv8-27A0A0G2JF28 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Igkv8-27A0A0G2JF28 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Igkv8-27A0A0G2JF28 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Igkv8-27A0A0G2JF28 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Igkv8-27A0A0G2JF28 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Igkv8-27A0A0G2JF28 Rab21-202ENSMUST00000218831 843 ntBASIC14.99□□□□□ -0.01
Igkv8-27A0A0G2JF28 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Igkv8-27A0A0G2JF28 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC14.99□□□□□ -0.01
Igkv8-27A0A0G2JF28 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Igkv8-27A0A0G2JF28 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms