Protein–RNA interactions for Protein: A0A0B4J1J5

Ighv9-3, Immunoglobulin heavy variable V9-3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv9-3A0A0B4J1J5 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ighv9-3A0A0B4J1J5 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ighv9-3A0A0B4J1J5 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ighv9-3A0A0B4J1J5 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ighv9-3A0A0B4J1J5 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ighv9-3A0A0B4J1J5 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.24■□□□□ 0.83
Ighv9-3A0A0B4J1J5 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ighv9-3A0A0B4J1J5 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
Ighv9-3A0A0B4J1J5 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ighv9-3A0A0B4J1J5 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
Ighv9-3A0A0B4J1J5 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Ighv9-3A0A0B4J1J5 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.22■□□□□ 0.83
Ighv9-3A0A0B4J1J5 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ighv9-3A0A0B4J1J5 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ighv9-3A0A0B4J1J5 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.21■□□□□ 0.83
Ighv9-3A0A0B4J1J5 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ighv9-3A0A0B4J1J5 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ighv9-3A0A0B4J1J5 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ighv9-3A0A0B4J1J5 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ighv9-3A0A0B4J1J5 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ighv9-3A0A0B4J1J5 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ighv9-3A0A0B4J1J5 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Ighv9-3A0A0B4J1J5 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ighv9-3A0A0B4J1J5 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.18■□□□□ 0.82
Ighv9-3A0A0B4J1J5 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ighv9-3A0A0B4J1J5 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ighv9-3A0A0B4J1J5 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ighv9-3A0A0B4J1J5 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.17■□□□□ 0.82
Ighv9-3A0A0B4J1J5 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ighv9-3A0A0B4J1J5 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ighv9-3A0A0B4J1J5 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ighv9-3A0A0B4J1J5 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ighv9-3A0A0B4J1J5 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.15■□□□□ 0.82
Ighv9-3A0A0B4J1J5 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ighv9-3A0A0B4J1J5 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ighv9-3A0A0B4J1J5 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ighv9-3A0A0B4J1J5 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Ighv9-3A0A0B4J1J5 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ighv9-3A0A0B4J1J5 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.12■□□□□ 0.81
Ighv9-3A0A0B4J1J5 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.12■□□□□ 0.81
Ighv9-3A0A0B4J1J5 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.11■□□□□ 0.81
Ighv9-3A0A0B4J1J5 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ighv9-3A0A0B4J1J5 Amer2-203ENSMUST00000225247 2662 ntBASIC20.1■□□□□ 0.81
Ighv9-3A0A0B4J1J5 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ighv9-3A0A0B4J1J5 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ighv9-3A0A0B4J1J5 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ighv9-3A0A0B4J1J5 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Ighv9-3A0A0B4J1J5 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ighv9-3A0A0B4J1J5 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Ighv9-3A0A0B4J1J5 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ighv9-3A0A0B4J1J5 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ighv9-3A0A0B4J1J5 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
Ighv9-3A0A0B4J1J5 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ighv9-3A0A0B4J1J5 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Ighv9-3A0A0B4J1J5 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ighv9-3A0A0B4J1J5 Gm6821-201ENSMUST00000107540 542 ntBASIC20.07■□□□□ 0.8
Ighv9-3A0A0B4J1J5 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ighv9-3A0A0B4J1J5 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ighv9-3A0A0B4J1J5 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ighv9-3A0A0B4J1J5 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ighv9-3A0A0B4J1J5 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ighv9-3A0A0B4J1J5 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ighv9-3A0A0B4J1J5 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ighv9-3A0A0B4J1J5 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ighv9-3A0A0B4J1J5 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ighv9-3A0A0B4J1J5 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ighv9-3A0A0B4J1J5 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Ighv9-3A0A0B4J1J5 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ighv9-3A0A0B4J1J5 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ighv9-3A0A0B4J1J5 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.04■□□□□ 0.8
Ighv9-3A0A0B4J1J5 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Ighv9-3A0A0B4J1J5 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ighv9-3A0A0B4J1J5 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ighv9-3A0A0B4J1J5 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ighv9-3A0A0B4J1J5 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ighv9-3A0A0B4J1J5 Nkain2-201ENSMUST00000092602 558 ntBASIC20.02■□□□□ 0.8
Ighv9-3A0A0B4J1J5 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.01■□□□□ 0.79
Ighv9-3A0A0B4J1J5 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ighv9-3A0A0B4J1J5 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Ighv9-3A0A0B4J1J5 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Ighv9-3A0A0B4J1J5 Fezf2-202ENSMUST00000224023 1917 ntBASIC20■□□□□ 0.79
Ighv9-3A0A0B4J1J5 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Ighv9-3A0A0B4J1J5 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ighv9-3A0A0B4J1J5 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ighv9-3A0A0B4J1J5 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20■□□□□ 0.79
Ighv9-3A0A0B4J1J5 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ighv9-3A0A0B4J1J5 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ighv9-3A0A0B4J1J5 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ighv9-3A0A0B4J1J5 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ighv9-3A0A0B4J1J5 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.99■□□□□ 0.79
Ighv9-3A0A0B4J1J5 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ighv9-3A0A0B4J1J5 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ighv9-3A0A0B4J1J5 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Ighv9-3A0A0B4J1J5 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ighv9-3A0A0B4J1J5 Gm8503-201ENSMUST00000118131 455 ntBASIC19.98■□□□□ 0.79
Ighv9-3A0A0B4J1J5 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ighv9-3A0A0B4J1J5 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ighv9-3A0A0B4J1J5 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Ighv9-3A0A0B4J1J5 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ighv9-3A0A0B4J1J5 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 9.8 ms