Protein–RNA interactions for Protein: A0A0A6YYE3

Trbv15, T cell receptor beta, variable 15 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv15A0A0A6YYE3 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trbv15A0A0A6YYE3 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trbv15A0A0A6YYE3 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trbv15A0A0A6YYE3 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.22■□□□□ 0.83
Trbv15A0A0A6YYE3 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trbv15A0A0A6YYE3 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trbv15A0A0A6YYE3 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trbv15A0A0A6YYE3 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
Trbv15A0A0A6YYE3 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Trbv15A0A0A6YYE3 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trbv15A0A0A6YYE3 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trbv15A0A0A6YYE3 Peli2-204ENSMUST00000226513 1320 ntBASIC20.18■□□□□ 0.82
Trbv15A0A0A6YYE3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trbv15A0A0A6YYE3 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trbv15A0A0A6YYE3 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trbv15A0A0A6YYE3 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Trbv15A0A0A6YYE3 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trbv15A0A0A6YYE3 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trbv15A0A0A6YYE3 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trbv15A0A0A6YYE3 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trbv15A0A0A6YYE3 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trbv15A0A0A6YYE3 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trbv15A0A0A6YYE3 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trbv15A0A0A6YYE3 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trbv15A0A0A6YYE3 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trbv15A0A0A6YYE3 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.13■□□□□ 0.81
Trbv15A0A0A6YYE3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trbv15A0A0A6YYE3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trbv15A0A0A6YYE3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trbv15A0A0A6YYE3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trbv15A0A0A6YYE3 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trbv15A0A0A6YYE3 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trbv15A0A0A6YYE3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trbv15A0A0A6YYE3 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trbv15A0A0A6YYE3 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trbv15A0A0A6YYE3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trbv15A0A0A6YYE3 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trbv15A0A0A6YYE3 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Trbv15A0A0A6YYE3 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trbv15A0A0A6YYE3 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trbv15A0A0A6YYE3 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trbv15A0A0A6YYE3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trbv15A0A0A6YYE3 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Trbv15A0A0A6YYE3 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trbv15A0A0A6YYE3 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trbv15A0A0A6YYE3 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trbv15A0A0A6YYE3 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trbv15A0A0A6YYE3 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Trbv15A0A0A6YYE3 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Trbv15A0A0A6YYE3 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trbv15A0A0A6YYE3 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trbv15A0A0A6YYE3 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trbv15A0A0A6YYE3 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trbv15A0A0A6YYE3 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Trbv15A0A0A6YYE3 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.03■□□□□ 0.8
Trbv15A0A0A6YYE3 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trbv15A0A0A6YYE3 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trbv15A0A0A6YYE3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.03■□□□□ 0.8
Trbv15A0A0A6YYE3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.03■□□□□ 0.8
Trbv15A0A0A6YYE3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trbv15A0A0A6YYE3 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trbv15A0A0A6YYE3 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trbv15A0A0A6YYE3 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trbv15A0A0A6YYE3 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trbv15A0A0A6YYE3 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trbv15A0A0A6YYE3 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trbv15A0A0A6YYE3 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trbv15A0A0A6YYE3 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Trbv15A0A0A6YYE3 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trbv15A0A0A6YYE3 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trbv15A0A0A6YYE3 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trbv15A0A0A6YYE3 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trbv15A0A0A6YYE3 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trbv15A0A0A6YYE3 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trbv15A0A0A6YYE3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trbv15A0A0A6YYE3 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.98■□□□□ 0.79
Trbv15A0A0A6YYE3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trbv15A0A0A6YYE3 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trbv15A0A0A6YYE3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.97■□□□□ 0.79
Trbv15A0A0A6YYE3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trbv15A0A0A6YYE3 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trbv15A0A0A6YYE3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trbv15A0A0A6YYE3 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trbv15A0A0A6YYE3 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trbv15A0A0A6YYE3 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trbv15A0A0A6YYE3 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trbv15A0A0A6YYE3 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trbv15A0A0A6YYE3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trbv15A0A0A6YYE3 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trbv15A0A0A6YYE3 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trbv15A0A0A6YYE3 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trbv15A0A0A6YYE3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trbv15A0A0A6YYE3 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trbv15A0A0A6YYE3 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Trbv15A0A0A6YYE3 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trbv15A0A0A6YYE3 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trbv15A0A0A6YYE3 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.92■□□□□ 0.78
Trbv15A0A0A6YYE3 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trbv15A0A0A6YYE3 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trbv15A0A0A6YYE3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms