Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trav4-2A0A075B638 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav4-2A0A075B638 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav4-2A0A075B638 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav4-2A0A075B638 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Trav4-2A0A075B638 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav4-2A0A075B638 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav4-2A0A075B638 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav4-2A0A075B638 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trav4-2A0A075B638 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trav4-2A0A075B638 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav4-2A0A075B638 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav4-2A0A075B638 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav4-2A0A075B638 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav4-2A0A075B638 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Trav4-2A0A075B638 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav4-2A0A075B638 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav4-2A0A075B638 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav4-2A0A075B638 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Trav4-2A0A075B638 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav4-2A0A075B638 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Trav4-2A0A075B638 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trav4-2A0A075B638 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC19.15■□□□□ 0.66
Trav4-2A0A075B638 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC19.15■□□□□ 0.66
Trav4-2A0A075B638 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trav4-2A0A075B638 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
Trav4-2A0A075B638 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav4-2A0A075B638 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav4-2A0A075B638 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav4-2A0A075B638 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav4-2A0A075B638 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav4-2A0A075B638 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trav4-2A0A075B638 Gm27322-201ENSMUST00000184007 104 ntBASIC19.12■□□□□ 0.65
Trav4-2A0A075B638 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav4-2A0A075B638 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav4-2A0A075B638 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.11■□□□□ 0.65
Trav4-2A0A075B638 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav4-2A0A075B638 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav4-2A0A075B638 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav4-2A0A075B638 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav4-2A0A075B638 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav4-2A0A075B638 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav4-2A0A075B638 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav4-2A0A075B638 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Trav4-2A0A075B638 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav4-2A0A075B638 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Trav4-2A0A075B638 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
Trav4-2A0A075B638 Gm17082-201ENSMUST00000166043 1091 ntBASIC19.09■□□□□ 0.65
Trav4-2A0A075B638 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trav4-2A0A075B638 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Trav4-2A0A075B638 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Trav4-2A0A075B638 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trav4-2A0A075B638 Gm25262-201ENSMUST00000174934 133 ntBASIC19.08■□□□□ 0.64
Trav4-2A0A075B638 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav4-2A0A075B638 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav4-2A0A075B638 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.08■□□□□ 0.64
Trav4-2A0A075B638 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav4-2A0A075B638 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav4-2A0A075B638 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav4-2A0A075B638 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav4-2A0A075B638 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav4-2A0A075B638 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav4-2A0A075B638 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.06■□□□□ 0.64
Trav4-2A0A075B638 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trav4-2A0A075B638 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trav4-2A0A075B638 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trav4-2A0A075B638 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav4-2A0A075B638 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trav4-2A0A075B638 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.04■□□□□ 0.64
Trav4-2A0A075B638 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trav4-2A0A075B638 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trav4-2A0A075B638 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav4-2A0A075B638 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav4-2A0A075B638 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav4-2A0A075B638 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav4-2A0A075B638 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav4-2A0A075B638 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trav4-2A0A075B638 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav4-2A0A075B638 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav4-2A0A075B638 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav4-2A0A075B638 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav4-2A0A075B638 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trav4-2A0A075B638 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Trav4-2A0A075B638 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trav4-2A0A075B638 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav4-2A0A075B638 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trav4-2A0A075B638 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.99■□□□□ 0.63
Trav4-2A0A075B638 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav4-2A0A075B638 Peli2-204ENSMUST00000226513 1320 ntBASIC18.98■□□□□ 0.63
Trav4-2A0A075B638 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Trav4-2A0A075B638 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.97■□□□□ 0.63
Trav4-2A0A075B638 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav4-2A0A075B638 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trav4-2A0A075B638 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trav4-2A0A075B638 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Trav4-2A0A075B638 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trav4-2A0A075B638 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trav4-2A0A075B638 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trav4-2A0A075B638 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trav4-2A0A075B638 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 9.4 ms