Protein–RNA interactions for Protein: Q8CDN1

Uncharacterized protein C3orf20 homolog, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8CDN1 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Q8CDN1 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Q8CDN1 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Q8CDN1 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Q8CDN1 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Q8CDN1 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Q8CDN1 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Q8CDN1 Gm11643-201ENSMUST00000119578 864 ntBASIC18.36■□□□□ 0.53
Q8CDN1 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Q8CDN1 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Q8CDN1 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Q8CDN1 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.36■□□□□ 0.53
Q8CDN1 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.36■□□□□ 0.53
Q8CDN1 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Q8CDN1 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Q8CDN1 Timm23-208ENSMUST00000226683 750 ntBASIC18.36■□□□□ 0.53
Q8CDN1 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Q8CDN1 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Q8CDN1 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Q8CDN1 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Q8CDN1 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Q8CDN1 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Q8CDN1 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Q8CDN1 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Q8CDN1 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Q8CDN1 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Q8CDN1 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Q8CDN1 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Q8CDN1 Gm10517-202ENSMUST00000192970 758 ntBASIC18.35■□□□□ 0.53
Q8CDN1 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.35■□□□□ 0.53
Q8CDN1 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Q8CDN1 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Q8CDN1 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Q8CDN1 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Q8CDN1 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Q8CDN1 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Q8CDN1 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Q8CDN1 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Q8CDN1 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Q8CDN1 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.34■□□□□ 0.53
Q8CDN1 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Q8CDN1 Gm30025-201ENSMUST00000218555 728 ntBASIC18.34■□□□□ 0.53
Q8CDN1 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Q8CDN1 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Q8CDN1 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Q8CDN1 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Q8CDN1 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Q8CDN1 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Q8CDN1 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Q8CDN1 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Q8CDN1 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Q8CDN1 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Q8CDN1 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Q8CDN1 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Q8CDN1 Fst-202ENSMUST00000223640 2612 ntBASIC18.33■□□□□ 0.53
Q8CDN1 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Q8CDN1 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.33■□□□□ 0.52
Q8CDN1 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Q8CDN1 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Q8CDN1 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Q8CDN1 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Q8CDN1 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Q8CDN1 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Q8CDN1 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.33■□□□□ 0.52
Q8CDN1 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Q8CDN1 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Q8CDN1 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Q8CDN1 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Q8CDN1 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Q8CDN1 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Q8CDN1 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Q8CDN1 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Q8CDN1 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Q8CDN1 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Q8CDN1 Gm7977-201ENSMUST00000193787 748 ntBASIC18.32■□□□□ 0.52
Q8CDN1 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.32■□□□□ 0.52
Q8CDN1 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Q8CDN1 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Q8CDN1 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Q8CDN1 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Q8CDN1 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Q8CDN1 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Q8CDN1 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Q8CDN1 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Q8CDN1 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Q8CDN1 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Q8CDN1 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Q8CDN1 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Q8CDN1 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Q8CDN1 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Q8CDN1 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Q8CDN1 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Q8CDN1 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Q8CDN1 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.31■□□□□ 0.52
Q8CDN1 Gm12085-201ENSMUST00000119263 940 ntBASIC18.31■□□□□ 0.52
Q8CDN1 Gm11539-201ENSMUST00000119837 557 ntBASIC18.31■□□□□ 0.52
Q8CDN1 Gm13436-201ENSMUST00000120418 567 ntBASIC18.31■□□□□ 0.52
Q8CDN1 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Q8CDN1 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Q8CDN1 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms