Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Uspl1Q3ULM6 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Uspl1Q3ULM6 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Uspl1Q3ULM6 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Uspl1Q3ULM6 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Uspl1Q3ULM6 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Uspl1Q3ULM6 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC23.06■■□□□ 1.28
Uspl1Q3ULM6 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Uspl1Q3ULM6 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Uspl1Q3ULM6 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Uspl1Q3ULM6 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
Uspl1Q3ULM6 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Uspl1Q3ULM6 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Uspl1Q3ULM6 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Uspl1Q3ULM6 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
Uspl1Q3ULM6 Gm44832-201ENSMUST00000208849 2303 ntBASIC23.05■■□□□ 1.28
Uspl1Q3ULM6 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Uspl1Q3ULM6 Zcchc6-207ENSMUST00000225576 2499 ntBASIC23.05■■□□□ 1.28
Uspl1Q3ULM6 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Uspl1Q3ULM6 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Uspl1Q3ULM6 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC23.05■■□□□ 1.28
Uspl1Q3ULM6 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC23.05■■□□□ 1.28
Uspl1Q3ULM6 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Uspl1Q3ULM6 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Uspl1Q3ULM6 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Uspl1Q3ULM6 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Uspl1Q3ULM6 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
Uspl1Q3ULM6 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Uspl1Q3ULM6 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Uspl1Q3ULM6 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Uspl1Q3ULM6 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Uspl1Q3ULM6 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Uspl1Q3ULM6 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Uspl1Q3ULM6 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Uspl1Q3ULM6 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC23.04■■□□□ 1.28
Uspl1Q3ULM6 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Uspl1Q3ULM6 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Uspl1Q3ULM6 AC153881.1-201ENSMUST00000214448 284 ntBASIC23.04■■□□□ 1.28
Uspl1Q3ULM6 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Uspl1Q3ULM6 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Uspl1Q3ULM6 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Uspl1Q3ULM6 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Uspl1Q3ULM6 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Uspl1Q3ULM6 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Uspl1Q3ULM6 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC23.03■■□□□ 1.28
Uspl1Q3ULM6 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Uspl1Q3ULM6 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC23.03■■□□□ 1.28
Uspl1Q3ULM6 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Uspl1Q3ULM6 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Uspl1Q3ULM6 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Uspl1Q3ULM6 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Uspl1Q3ULM6 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC23.03■■□□□ 1.28
Uspl1Q3ULM6 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Uspl1Q3ULM6 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
Uspl1Q3ULM6 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Uspl1Q3ULM6 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Uspl1Q3ULM6 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Uspl1Q3ULM6 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC23.03■■□□□ 1.28
Uspl1Q3ULM6 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Uspl1Q3ULM6 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Uspl1Q3ULM6 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Uspl1Q3ULM6 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC23.02■■□□□ 1.28
Uspl1Q3ULM6 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Uspl1Q3ULM6 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Uspl1Q3ULM6 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Uspl1Q3ULM6 AC175538.1-201ENSMUST00000225343 1269 ntBASIC23.02■■□□□ 1.28
Uspl1Q3ULM6 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Uspl1Q3ULM6 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Uspl1Q3ULM6 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC23.02■■□□□ 1.28
Uspl1Q3ULM6 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Uspl1Q3ULM6 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Uspl1Q3ULM6 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Uspl1Q3ULM6 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Uspl1Q3ULM6 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Uspl1Q3ULM6 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Uspl1Q3ULM6 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Uspl1Q3ULM6 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC23.01■■□□□ 1.27
Uspl1Q3ULM6 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC23.01■■□□□ 1.27
Uspl1Q3ULM6 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC23.01■■□□□ 1.27
Uspl1Q3ULM6 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
Uspl1Q3ULM6 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Uspl1Q3ULM6 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Uspl1Q3ULM6 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Uspl1Q3ULM6 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Uspl1Q3ULM6 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC23.01■■□□□ 1.27
Uspl1Q3ULM6 CT010444.2-201ENSMUST00000217877 1629 ntBASIC23■■□□□ 1.27
Uspl1Q3ULM6 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Uspl1Q3ULM6 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Uspl1Q3ULM6 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC23■■□□□ 1.27
Uspl1Q3ULM6 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC23■■□□□ 1.27
Uspl1Q3ULM6 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Uspl1Q3ULM6 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Uspl1Q3ULM6 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Uspl1Q3ULM6 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Uspl1Q3ULM6 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Uspl1Q3ULM6 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Uspl1Q3ULM6 Fcho2-208ENSMUST00000224992 2964 ntBASIC22.99■■□□□ 1.27
Uspl1Q3ULM6 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
Uspl1Q3ULM6 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Uspl1Q3ULM6 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms