Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tnfrsf1aP25118 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Tnfrsf1aP25118 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Tnfrsf1aP25118 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Tnfrsf1aP25118 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tnfrsf1aP25118 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tnfrsf1aP25118 Gm6365-201ENSMUST00000054711 744 ntBASIC14.95□□□□□ -0.02
Tnfrsf1aP25118 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tnfrsf1aP25118 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Tnfrsf1aP25118 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tnfrsf1aP25118 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Tnfrsf1aP25118 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC14.95□□□□□ -0.02
Tnfrsf1aP25118 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tnfrsf1aP25118 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Tnfrsf1aP25118 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Tnfrsf1aP25118 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tnfrsf1aP25118 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tnfrsf1aP25118 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tnfrsf1aP25118 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Tnfrsf1aP25118 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC14.95□□□□□ -0.02
Tnfrsf1aP25118 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Tnfrsf1aP25118 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf1aP25118 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Tnfrsf1aP25118 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf1aP25118 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Tnfrsf1aP25118 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf1aP25118 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf1aP25118 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf1aP25118 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC14.94□□□□□ -0.02
Tnfrsf1aP25118 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf1aP25118 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf1aP25118 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf1aP25118 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Tnfrsf1aP25118 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC14.94□□□□□ -0.02
Tnfrsf1aP25118 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Tnfrsf1aP25118 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC14.94□□□□□ -0.02
Tnfrsf1aP25118 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf1aP25118 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Tnfrsf1aP25118 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf1aP25118 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf1aP25118 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf1aP25118 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf1aP25118 Gm38345-201ENSMUST00000192635 1748 ntBASIC14.94□□□□□ -0.02
Tnfrsf1aP25118 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf1aP25118 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Tnfrsf1aP25118 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf1aP25118 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Tnfrsf1aP25118 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf1aP25118 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf1aP25118 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf1aP25118 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tnfrsf1aP25118 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Tnfrsf1aP25118 Gm5828-201ENSMUST00000071842 1860 ntBASIC14.93□□□□□ -0.02
Tnfrsf1aP25118 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tnfrsf1aP25118 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tnfrsf1aP25118 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC14.93□□□□□ -0.02
Tnfrsf1aP25118 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tnfrsf1aP25118 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tnfrsf1aP25118 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tnfrsf1aP25118 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tnfrsf1aP25118 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.92□□□□□ -0.02
Tnfrsf1aP25118 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfrsf1aP25118 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfrsf1aP25118 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Tnfrsf1aP25118 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfrsf1aP25118 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfrsf1aP25118 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC14.92□□□□□ -0.02
Tnfrsf1aP25118 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfrsf1aP25118 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfrsf1aP25118 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.92□□□□□ -0.02
Tnfrsf1aP25118 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC14.92□□□□□ -0.02
Tnfrsf1aP25118 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfrsf1aP25118 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfrsf1aP25118 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfrsf1aP25118 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tnfrsf1aP25118 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.91□□□□□ -0.02
Tnfrsf1aP25118 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tnfrsf1aP25118 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Tnfrsf1aP25118 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tnfrsf1aP25118 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Tnfrsf1aP25118 Gm7290-201ENSMUST00000104990 617 ntBASIC14.91□□□□□ -0.02
Tnfrsf1aP25118 Gm12918-201ENSMUST00000120234 636 ntBASIC14.91□□□□□ -0.02
Tnfrsf1aP25118 Gm15710-201ENSMUST00000121821 636 ntBASIC14.91□□□□□ -0.02
Tnfrsf1aP25118 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Tnfrsf1aP25118 Gm26571-201ENSMUST00000181399 666 ntBASIC14.91□□□□□ -0.02
Tnfrsf1aP25118 Gm5075-201ENSMUST00000196916 622 ntBASIC14.91□□□□□ -0.02
Tnfrsf1aP25118 Gm5297-201ENSMUST00000198555 1171 ntBASIC14.91□□□□□ -0.02
Tnfrsf1aP25118 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC14.91□□□□□ -0.02
Tnfrsf1aP25118 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC14.91□□□□□ -0.02
Tnfrsf1aP25118 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Tnfrsf1aP25118 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Tnfrsf1aP25118 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tnfrsf1aP25118 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tnfrsf1aP25118 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tnfrsf1aP25118 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tnfrsf1aP25118 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Tnfrsf1aP25118 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.9□□□□□ -0.02
Tnfrsf1aP25118 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tnfrsf1aP25118 Gm10849-201ENSMUST00000100397 618 ntBASIC14.9□□□□□ -0.02
Tnfrsf1aP25118 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms