Protein–RNA interactions for Protein: J3QMS7

Gm11236, Predicted gene 11236, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11236J3QMS7 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm11236J3QMS7 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Gm11236J3QMS7 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Gm11236J3QMS7 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm11236J3QMS7 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.68■□□□□ 0.58
Gm11236J3QMS7 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Gm11236J3QMS7 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm11236J3QMS7 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Gm11236J3QMS7 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm11236J3QMS7 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Gm11236J3QMS7 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm11236J3QMS7 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm11236J3QMS7 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm11236J3QMS7 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm11236J3QMS7 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm11236J3QMS7 Gm21362-201ENSMUST00000194272 928 ntBASIC18.67■□□□□ 0.58
Gm11236J3QMS7 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.67■□□□□ 0.58
Gm11236J3QMS7 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm11236J3QMS7 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm11236J3QMS7 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm11236J3QMS7 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm11236J3QMS7 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm11236J3QMS7 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm11236J3QMS7 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Gm11236J3QMS7 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gm11236J3QMS7 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm11236J3QMS7 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm11236J3QMS7 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm11236J3QMS7 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm11236J3QMS7 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm11236J3QMS7 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.66■□□□□ 0.58
Gm11236J3QMS7 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Gm11236J3QMS7 Gm16061-201ENSMUST00000122167 857 ntBASIC18.66■□□□□ 0.58
Gm11236J3QMS7 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm11236J3QMS7 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.66■□□□□ 0.58
Gm11236J3QMS7 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm11236J3QMS7 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Gm11236J3QMS7 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Gm11236J3QMS7 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Gm11236J3QMS7 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gm11236J3QMS7 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Gm11236J3QMS7 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Gm11236J3QMS7 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm11236J3QMS7 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm11236J3QMS7 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Gm11236J3QMS7 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm11236J3QMS7 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.65■□□□□ 0.58
Gm11236J3QMS7 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Gm11236J3QMS7 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.65■□□□□ 0.58
Gm11236J3QMS7 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.65■□□□□ 0.58
Gm11236J3QMS7 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm11236J3QMS7 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm11236J3QMS7 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm11236J3QMS7 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm11236J3QMS7 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gm11236J3QMS7 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Gm11236J3QMS7 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.65■□□□□ 0.58
Gm11236J3QMS7 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.64■□□□□ 0.58
Gm11236J3QMS7 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Gm11236J3QMS7 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm11236J3QMS7 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm11236J3QMS7 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm11236J3QMS7 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm11236J3QMS7 Gm13474-201ENSMUST00000122466 815 ntBASIC18.64■□□□□ 0.57
Gm11236J3QMS7 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.64■□□□□ 0.57
Gm11236J3QMS7 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.64■□□□□ 0.57
Gm11236J3QMS7 Gm18101-201ENSMUST00000215769 548 ntBASIC18.64■□□□□ 0.57
Gm11236J3QMS7 Gm7791-201ENSMUST00000219066 539 ntBASIC18.64■□□□□ 0.57
Gm11236J3QMS7 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm11236J3QMS7 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm11236J3QMS7 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm11236J3QMS7 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm11236J3QMS7 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm11236J3QMS7 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm11236J3QMS7 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gm11236J3QMS7 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Gm11236J3QMS7 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm11236J3QMS7 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm11236J3QMS7 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm11236J3QMS7 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm11236J3QMS7 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm11236J3QMS7 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm11236J3QMS7 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.63■□□□□ 0.57
Gm11236J3QMS7 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm11236J3QMS7 AA414768-201ENSMUST00000121924 1257 ntBASIC18.63■□□□□ 0.57
Gm11236J3QMS7 Gm22697-201ENSMUST00000175194 63 ntBASIC18.63■□□□□ 0.57
Gm11236J3QMS7 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.63■□□□□ 0.57
Gm11236J3QMS7 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Gm11236J3QMS7 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm11236J3QMS7 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Gm11236J3QMS7 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Gm11236J3QMS7 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm11236J3QMS7 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Gm11236J3QMS7 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm11236J3QMS7 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Gm11236J3QMS7 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Gm11236J3QMS7 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.62■□□□□ 0.57
Gm11236J3QMS7 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm11236J3QMS7 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm11236J3QMS7 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms