Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rsph3bQ9DA80 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Rsph3bQ9DA80 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rsph3bQ9DA80 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Rsph3bQ9DA80 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Rsph3bQ9DA80 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rsph3bQ9DA80 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rsph3bQ9DA80 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rsph3bQ9DA80 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Rsph3bQ9DA80 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Rsph3bQ9DA80 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rsph3bQ9DA80 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rsph3bQ9DA80 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rsph3bQ9DA80 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rsph3bQ9DA80 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rsph3bQ9DA80 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
Rsph3bQ9DA80 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rsph3bQ9DA80 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.57■□□□□ 0.72
Rsph3bQ9DA80 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rsph3bQ9DA80 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Rsph3bQ9DA80 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Rsph3bQ9DA80 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rsph3bQ9DA80 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rsph3bQ9DA80 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rsph3bQ9DA80 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.56■□□□□ 0.72
Rsph3bQ9DA80 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rsph3bQ9DA80 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Rsph3bQ9DA80 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rsph3bQ9DA80 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.56■□□□□ 0.72
Rsph3bQ9DA80 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rsph3bQ9DA80 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.56■□□□□ 0.72
Rsph3bQ9DA80 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
Rsph3bQ9DA80 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Rsph3bQ9DA80 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rsph3bQ9DA80 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rsph3bQ9DA80 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rsph3bQ9DA80 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rsph3bQ9DA80 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rsph3bQ9DA80 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Rsph3bQ9DA80 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.55■□□□□ 0.72
Rsph3bQ9DA80 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.55■□□□□ 0.72
Rsph3bQ9DA80 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.55■□□□□ 0.72
Rsph3bQ9DA80 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rsph3bQ9DA80 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rsph3bQ9DA80 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Rsph3bQ9DA80 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rsph3bQ9DA80 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rsph3bQ9DA80 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.55■□□□□ 0.72
Rsph3bQ9DA80 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rsph3bQ9DA80 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rsph3bQ9DA80 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
Rsph3bQ9DA80 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rsph3bQ9DA80 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rsph3bQ9DA80 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.54■□□□□ 0.72
Rsph3bQ9DA80 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rsph3bQ9DA80 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rsph3bQ9DA80 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rsph3bQ9DA80 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rsph3bQ9DA80 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rsph3bQ9DA80 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rsph3bQ9DA80 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rsph3bQ9DA80 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Rsph3bQ9DA80 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Rsph3bQ9DA80 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Rsph3bQ9DA80 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rsph3bQ9DA80 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rsph3bQ9DA80 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Rsph3bQ9DA80 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Rsph3bQ9DA80 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Rsph3bQ9DA80 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Rsph3bQ9DA80 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.54■□□□□ 0.72
Rsph3bQ9DA80 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.54■□□□□ 0.72
Rsph3bQ9DA80 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.54■□□□□ 0.72
Rsph3bQ9DA80 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rsph3bQ9DA80 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rsph3bQ9DA80 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rsph3bQ9DA80 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rsph3bQ9DA80 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.54■□□□□ 0.72
Rsph3bQ9DA80 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
Rsph3bQ9DA80 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.54■□□□□ 0.72
Rsph3bQ9DA80 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rsph3bQ9DA80 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Rsph3bQ9DA80 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rsph3bQ9DA80 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.53■□□□□ 0.72
Rsph3bQ9DA80 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rsph3bQ9DA80 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rsph3bQ9DA80 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rsph3bQ9DA80 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rsph3bQ9DA80 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rsph3bQ9DA80 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rsph3bQ9DA80 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.53■□□□□ 0.72
Rsph3bQ9DA80 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rsph3bQ9DA80 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rsph3bQ9DA80 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rsph3bQ9DA80 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rsph3bQ9DA80 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.52■□□□□ 0.72
Rsph3bQ9DA80 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rsph3bQ9DA80 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.52■□□□□ 0.72
Rsph3bQ9DA80 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rsph3bQ9DA80 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 101.6 ms