Protein–RNA interactions for Protein: Q9CQE0

Rnf138, E3 ubiquitin-protein ligase RNF138, mousemouse

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf138Q9CQE0 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf138Q9CQE0 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf138Q9CQE0 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf138Q9CQE0 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf138Q9CQE0 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf138Q9CQE0 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf138Q9CQE0 Gm38027-201ENSMUST00000192315 235 ntBASIC16.76■□□□□ 0.27
Rnf138Q9CQE0 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.76■□□□□ 0.27
Rnf138Q9CQE0 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf138Q9CQE0 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.76■□□□□ 0.27
Rnf138Q9CQE0 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf138Q9CQE0 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf138Q9CQE0 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Rnf138Q9CQE0 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rnf138Q9CQE0 Idnk-204ENSMUST00000226010 1898 ntBASIC16.76■□□□□ 0.27
Rnf138Q9CQE0 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf138Q9CQE0 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf138Q9CQE0 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf138Q9CQE0 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf138Q9CQE0 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.75■□□□□ 0.27
Rnf138Q9CQE0 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf138Q9CQE0 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf138Q9CQE0 Gm43799-201ENSMUST00000201845 579 ntBASIC16.75■□□□□ 0.27
Rnf138Q9CQE0 Gm30025-201ENSMUST00000218555 728 ntBASIC16.75■□□□□ 0.27
Rnf138Q9CQE0 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf138Q9CQE0 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf138Q9CQE0 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf138Q9CQE0 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf138Q9CQE0 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf138Q9CQE0 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf138Q9CQE0 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Rnf138Q9CQE0 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rnf138Q9CQE0 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf138Q9CQE0 Gm13559-201ENSMUST00000120476 863 ntBASIC16.74■□□□□ 0.27
Rnf138Q9CQE0 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf138Q9CQE0 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf138Q9CQE0 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.74■□□□□ 0.27
Rnf138Q9CQE0 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.74■□□□□ 0.27
Rnf138Q9CQE0 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Rnf138Q9CQE0 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf138Q9CQE0 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf138Q9CQE0 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rnf138Q9CQE0 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Rnf138Q9CQE0 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.74■□□□□ 0.27
Rnf138Q9CQE0 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf138Q9CQE0 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Rnf138Q9CQE0 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf138Q9CQE0 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf138Q9CQE0 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.73■□□□□ 0.27
Rnf138Q9CQE0 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Rnf138Q9CQE0 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf138Q9CQE0 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf138Q9CQE0 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf138Q9CQE0 Gm24841-201ENSMUST00000158676 357 ntBASIC16.73■□□□□ 0.27
Rnf138Q9CQE0 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Rnf138Q9CQE0 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.73■□□□□ 0.27
Rnf138Q9CQE0 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf138Q9CQE0 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.73■□□□□ 0.27
Rnf138Q9CQE0 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf138Q9CQE0 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf138Q9CQE0 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf138Q9CQE0 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf138Q9CQE0 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rnf138Q9CQE0 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.72■□□□□ 0.27
Rnf138Q9CQE0 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf138Q9CQE0 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf138Q9CQE0 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf138Q9CQE0 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Rnf138Q9CQE0 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf138Q9CQE0 Gm6433-201ENSMUST00000118634 875 ntBASIC16.72■□□□□ 0.27
Rnf138Q9CQE0 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.72■□□□□ 0.27
Rnf138Q9CQE0 Gm11539-201ENSMUST00000119837 557 ntBASIC16.72■□□□□ 0.27
Rnf138Q9CQE0 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Rnf138Q9CQE0 Gm13436-201ENSMUST00000120418 567 ntBASIC16.72■□□□□ 0.27
Rnf138Q9CQE0 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Rnf138Q9CQE0 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf138Q9CQE0 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf138Q9CQE0 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf138Q9CQE0 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf138Q9CQE0 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf138Q9CQE0 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf138Q9CQE0 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf138Q9CQE0 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rnf138Q9CQE0 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Rnf138Q9CQE0 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf138Q9CQE0 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Rnf138Q9CQE0 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Rnf138Q9CQE0 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf138Q9CQE0 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf138Q9CQE0 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf138Q9CQE0 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf138Q9CQE0 Gm12085-201ENSMUST00000119263 940 ntBASIC16.71■□□□□ 0.27
Rnf138Q9CQE0 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rnf138Q9CQE0 Mir8112-201ENSMUST00000184382 131 ntBASIC16.71■□□□□ 0.27
Rnf138Q9CQE0 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.71■□□□□ 0.27
Rnf138Q9CQE0 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.71■□□□□ 0.27
Rnf138Q9CQE0 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Rnf138Q9CQE0 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Rnf138Q9CQE0 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.71■□□□□ 0.27
Rnf138Q9CQE0 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms