Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Brf2Q3UAW9 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Brf2Q3UAW9 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Brf2Q3UAW9 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Brf2Q3UAW9 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Brf2Q3UAW9 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Brf2Q3UAW9 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Brf2Q3UAW9 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Brf2Q3UAW9 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Brf2Q3UAW9 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Brf2Q3UAW9 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Brf2Q3UAW9 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Brf2Q3UAW9 Rarb-207ENSMUST00000225921 2756 ntBASIC16.84■□□□□ 0.29
Brf2Q3UAW9 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Brf2Q3UAW9 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Brf2Q3UAW9 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Brf2Q3UAW9 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Brf2Q3UAW9 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Brf2Q3UAW9 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Brf2Q3UAW9 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Brf2Q3UAW9 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Brf2Q3UAW9 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Brf2Q3UAW9 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Brf2Q3UAW9 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Brf2Q3UAW9 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Brf2Q3UAW9 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Brf2Q3UAW9 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Brf2Q3UAW9 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Brf2Q3UAW9 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Brf2Q3UAW9 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Brf2Q3UAW9 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Brf2Q3UAW9 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.84■□□□□ 0.29
Brf2Q3UAW9 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Brf2Q3UAW9 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Brf2Q3UAW9 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Brf2Q3UAW9 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Brf2Q3UAW9 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Brf2Q3UAW9 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Brf2Q3UAW9 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Brf2Q3UAW9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.83■□□□□ 0.28
Brf2Q3UAW9 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.83■□□□□ 0.28
Brf2Q3UAW9 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Brf2Q3UAW9 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.83■□□□□ 0.28
Brf2Q3UAW9 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Brf2Q3UAW9 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Brf2Q3UAW9 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Brf2Q3UAW9 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Brf2Q3UAW9 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Brf2Q3UAW9 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Brf2Q3UAW9 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Brf2Q3UAW9 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.83■□□□□ 0.28
Brf2Q3UAW9 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Brf2Q3UAW9 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Brf2Q3UAW9 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Brf2Q3UAW9 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Brf2Q3UAW9 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.82■□□□□ 0.28
Brf2Q3UAW9 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Brf2Q3UAW9 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.82■□□□□ 0.28
Brf2Q3UAW9 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Brf2Q3UAW9 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Brf2Q3UAW9 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Brf2Q3UAW9 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Brf2Q3UAW9 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Brf2Q3UAW9 Gm2399-201ENSMUST00000104944 225 ntBASIC16.82■□□□□ 0.28
Brf2Q3UAW9 Gm13148-201ENSMUST00000118892 745 ntBASIC16.82■□□□□ 0.28
Brf2Q3UAW9 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.82■□□□□ 0.28
Brf2Q3UAW9 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Brf2Q3UAW9 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Brf2Q3UAW9 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Brf2Q3UAW9 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Brf2Q3UAW9 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Brf2Q3UAW9 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Brf2Q3UAW9 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Brf2Q3UAW9 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Brf2Q3UAW9 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Brf2Q3UAW9 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Brf2Q3UAW9 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Brf2Q3UAW9 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Brf2Q3UAW9 Gm12933-201ENSMUST00000120203 872 ntBASIC16.81■□□□□ 0.28
Brf2Q3UAW9 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Brf2Q3UAW9 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.81■□□□□ 0.28
Brf2Q3UAW9 Gm26524-201ENSMUST00000192339 390 ntBASIC16.81■□□□□ 0.28
Brf2Q3UAW9 Gm37179-201ENSMUST00000194862 823 ntBASIC16.81■□□□□ 0.28
Brf2Q3UAW9 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Brf2Q3UAW9 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.81■□□□□ 0.28
Brf2Q3UAW9 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Brf2Q3UAW9 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Brf2Q3UAW9 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.81■□□□□ 0.28
Brf2Q3UAW9 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Brf2Q3UAW9 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Brf2Q3UAW9 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Brf2Q3UAW9 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.8■□□□□ 0.28
Brf2Q3UAW9 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Brf2Q3UAW9 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Brf2Q3UAW9 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Brf2Q3UAW9 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.8■□□□□ 0.28
Brf2Q3UAW9 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Brf2Q3UAW9 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Brf2Q3UAW9 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Brf2Q3UAW9 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms