Protein–RNA interactions for Protein: O88623

Usp2, Ubiquitin carboxyl-terminal hydrolase 2, mousemouse

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp2O88623 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Usp2O88623 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp2O88623 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp2O88623 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Usp2O88623 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.2■□□□□ 0.5
Usp2O88623 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp2O88623 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Usp2O88623 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp2O88623 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp2O88623 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp2O88623 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp2O88623 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Usp2O88623 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Usp2O88623 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp2O88623 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp2O88623 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp2O88623 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Usp2O88623 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp2O88623 Gm15565-201ENSMUST00000118890 427 ntBASIC18.18■□□□□ 0.5
Usp2O88623 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Usp2O88623 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp2O88623 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.18■□□□□ 0.5
Usp2O88623 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp2O88623 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp2O88623 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp2O88623 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp2O88623 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Usp2O88623 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Usp2O88623 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.17■□□□□ 0.5
Usp2O88623 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp2O88623 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp2O88623 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp2O88623 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp2O88623 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp2O88623 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp2O88623 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.17■□□□□ 0.5
Usp2O88623 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp2O88623 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Usp2O88623 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.17■□□□□ 0.5
Usp2O88623 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp2O88623 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp2O88623 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Usp2O88623 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.17■□□□□ 0.5
Usp2O88623 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp2O88623 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.17■□□□□ 0.5
Usp2O88623 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Usp2O88623 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp2O88623 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.17■□□□□ 0.5
Usp2O88623 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp2O88623 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Usp2O88623 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp2O88623 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Usp2O88623 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.16■□□□□ 0.5
Usp2O88623 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp2O88623 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Usp2O88623 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.16■□□□□ 0.5
Usp2O88623 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Usp2O88623 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Usp2O88623 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp2O88623 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp2O88623 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.16■□□□□ 0.5
Usp2O88623 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
Usp2O88623 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp2O88623 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp2O88623 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp2O88623 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Usp2O88623 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp2O88623 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.15■□□□□ 0.5
Usp2O88623 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Usp2O88623 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.15■□□□□ 0.5
Usp2O88623 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Usp2O88623 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.15■□□□□ 0.5
Usp2O88623 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Usp2O88623 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Usp2O88623 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp2O88623 Gm5417-201ENSMUST00000079706 384 ntBASIC18.15■□□□□ 0.5
Usp2O88623 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Usp2O88623 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp2O88623 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.15■□□□□ 0.5
Usp2O88623 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Usp2O88623 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Usp2O88623 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Usp2O88623 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Usp2O88623 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Usp2O88623 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Usp2O88623 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp2O88623 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Usp2O88623 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Usp2O88623 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Usp2O88623 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.14■□□□□ 0.49
Usp2O88623 Gm13401-201ENSMUST00000117074 291 ntBASIC18.14■□□□□ 0.49
Usp2O88623 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp2O88623 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp2O88623 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Usp2O88623 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Usp2O88623 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.14■□□□□ 0.49
Usp2O88623 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp2O88623 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp2O88623 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Usp2O88623 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms