Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb2Q91Y00 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb2Q91Y00 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb2Q91Y00 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb2Q91Y00 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb2Q91Y00 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Pcdhb2Q91Y00 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.06■□□□□ 0.64
Pcdhb2Q91Y00 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb2Q91Y00 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb2Q91Y00 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb2Q91Y00 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb2Q91Y00 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb2Q91Y00 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb2Q91Y00 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb2Q91Y00 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb2Q91Y00 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb2Q91Y00 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb2Q91Y00 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Pcdhb2Q91Y00 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb2Q91Y00 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb2Q91Y00 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb2Q91Y00 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb2Q91Y00 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.04■□□□□ 0.64
Pcdhb2Q91Y00 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb2Q91Y00 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb2Q91Y00 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb2Q91Y00 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb2Q91Y00 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.04■□□□□ 0.64
Pcdhb2Q91Y00 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb2Q91Y00 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb2Q91Y00 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.04■□□□□ 0.64
Pcdhb2Q91Y00 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb2Q91Y00 Mtag2-201ENSMUST00000058665 714 ntBASIC19.04■□□□□ 0.64
Pcdhb2Q91Y00 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb2Q91Y00 Gm10812-201ENSMUST00000099864 546 ntBASIC19.04■□□□□ 0.64
Pcdhb2Q91Y00 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb2Q91Y00 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Pcdhb2Q91Y00 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.04■□□□□ 0.64
Pcdhb2Q91Y00 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Pcdhb2Q91Y00 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb2Q91Y00 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb2Q91Y00 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb2Q91Y00 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb2Q91Y00 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.03■□□□□ 0.64
Pcdhb2Q91Y00 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb2Q91Y00 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb2Q91Y00 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb2Q91Y00 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.03■□□□□ 0.64
Pcdhb2Q91Y00 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.03■□□□□ 0.64
Pcdhb2Q91Y00 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.03■□□□□ 0.64
Pcdhb2Q91Y00 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb2Q91Y00 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb2Q91Y00 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb2Q91Y00 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb2Q91Y00 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb2Q91Y00 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb2Q91Y00 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb2Q91Y00 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb2Q91Y00 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb2Q91Y00 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.02■□□□□ 0.64
Pcdhb2Q91Y00 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb2Q91Y00 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb2Q91Y00 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb2Q91Y00 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Pcdhb2Q91Y00 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb2Q91Y00 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb2Q91Y00 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb2Q91Y00 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.02■□□□□ 0.64
Pcdhb2Q91Y00 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb2Q91Y00 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.02■□□□□ 0.64
Pcdhb2Q91Y00 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.02■□□□□ 0.64
Pcdhb2Q91Y00 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdhb2Q91Y00 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdhb2Q91Y00 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdhb2Q91Y00 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb2Q91Y00 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb2Q91Y00 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb2Q91Y00 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb2Q91Y00 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb2Q91Y00 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.01■□□□□ 0.63
Pcdhb2Q91Y00 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb2Q91Y00 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.01■□□□□ 0.63
Pcdhb2Q91Y00 Gm10138-203ENSMUST00000206952 366 ntBASIC19.01■□□□□ 0.63
Pcdhb2Q91Y00 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.01■□□□□ 0.63
Pcdhb2Q91Y00 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Pcdhb2Q91Y00 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb2Q91Y00 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb2Q91Y00 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb2Q91Y00 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb2Q91Y00 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Pcdhb2Q91Y00 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb2Q91Y00 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
Pcdhb2Q91Y00 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Pcdhb2Q91Y00 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb2Q91Y00 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb2Q91Y00 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Pcdhb2Q91Y00 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19■□□□□ 0.63
Pcdhb2Q91Y00 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb2Q91Y00 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb2Q91Y00 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms