Protein–RNA interactions for Protein: Q61116

Znf235, Zinc finger protein 235, mousemouse

Predictions only

Length 645 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf235Q61116 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Znf235Q61116 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Znf235Q61116 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.85■□□□□ 0.61
Znf235Q61116 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Znf235Q61116 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.84■□□□□ 0.61
Znf235Q61116 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Znf235Q61116 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Znf235Q61116 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Znf235Q61116 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Znf235Q61116 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Znf235Q61116 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Znf235Q61116 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Znf235Q61116 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Znf235Q61116 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Znf235Q61116 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Znf235Q61116 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Znf235Q61116 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Znf235Q61116 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Znf235Q61116 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Znf235Q61116 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Znf235Q61116 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Znf235Q61116 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Znf235Q61116 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Znf235Q61116 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Znf235Q61116 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Znf235Q61116 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Znf235Q61116 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Znf235Q61116 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Znf235Q61116 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Znf235Q61116 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Znf235Q61116 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Znf235Q61116 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Znf235Q61116 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Znf235Q61116 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Znf235Q61116 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Znf235Q61116 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Znf235Q61116 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.82■□□□□ 0.6
Znf235Q61116 Gm11539-201ENSMUST00000119837 557 ntBASIC18.82■□□□□ 0.6
Znf235Q61116 Gm13436-201ENSMUST00000120418 567 ntBASIC18.82■□□□□ 0.6
Znf235Q61116 Gm13559-201ENSMUST00000120476 863 ntBASIC18.82■□□□□ 0.6
Znf235Q61116 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.82■□□□□ 0.6
Znf235Q61116 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Znf235Q61116 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.82■□□□□ 0.6
Znf235Q61116 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.82■□□□□ 0.6
Znf235Q61116 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.82■□□□□ 0.6
Znf235Q61116 Gm30025-201ENSMUST00000218555 728 ntBASIC18.82■□□□□ 0.6
Znf235Q61116 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Znf235Q61116 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Znf235Q61116 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Znf235Q61116 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Znf235Q61116 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Znf235Q61116 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Znf235Q61116 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Znf235Q61116 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Znf235Q61116 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.81■□□□□ 0.6
Znf235Q61116 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Znf235Q61116 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Znf235Q61116 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.81■□□□□ 0.6
Znf235Q61116 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Znf235Q61116 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Znf235Q61116 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.81■□□□□ 0.6
Znf235Q61116 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.81■□□□□ 0.6
Znf235Q61116 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.81■□□□□ 0.6
Znf235Q61116 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.81■□□□□ 0.6
Znf235Q61116 Gm9987-201ENSMUST00000069768 567 ntBASIC18.81■□□□□ 0.6
Znf235Q61116 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Znf235Q61116 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Znf235Q61116 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.81■□□□□ 0.6
Znf235Q61116 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Znf235Q61116 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Znf235Q61116 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Znf235Q61116 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Znf235Q61116 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Znf235Q61116 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Znf235Q61116 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Znf235Q61116 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Znf235Q61116 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Znf235Q61116 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Znf235Q61116 Gm6433-201ENSMUST00000118634 875 ntBASIC18.8■□□□□ 0.6
Znf235Q61116 Gm13836-201ENSMUST00000121159 501 ntBASIC18.8■□□□□ 0.6
Znf235Q61116 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.8■□□□□ 0.6
Znf235Q61116 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.8■□□□□ 0.6
Znf235Q61116 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Znf235Q61116 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Znf235Q61116 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Znf235Q61116 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Znf235Q61116 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Znf235Q61116 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Znf235Q61116 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Znf235Q61116 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Znf235Q61116 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.79■□□□□ 0.6
Znf235Q61116 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.79■□□□□ 0.6
Znf235Q61116 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Znf235Q61116 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Znf235Q61116 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Znf235Q61116 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Znf235Q61116 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Znf235Q61116 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Znf235Q61116 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Znf235Q61116 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms