Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Uspl1Q3ULM6 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
Uspl1Q3ULM6 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC23.24■■□□□ 1.31
Uspl1Q3ULM6 Gm13168-201ENSMUST00000121771 632 ntBASIC23.24■■□□□ 1.31
Uspl1Q3ULM6 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Uspl1Q3ULM6 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC23.24■■□□□ 1.31
Uspl1Q3ULM6 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Uspl1Q3ULM6 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Uspl1Q3ULM6 Gm18025-201ENSMUST00000221733 862 ntBASIC23.24■■□□□ 1.31
Uspl1Q3ULM6 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Uspl1Q3ULM6 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC23.24■■□□□ 1.31
Uspl1Q3ULM6 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Uspl1Q3ULM6 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
Uspl1Q3ULM6 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Uspl1Q3ULM6 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
Uspl1Q3ULM6 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
Uspl1Q3ULM6 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC23.23■■□□□ 1.31
Uspl1Q3ULM6 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Uspl1Q3ULM6 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Uspl1Q3ULM6 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Uspl1Q3ULM6 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Uspl1Q3ULM6 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Uspl1Q3ULM6 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Uspl1Q3ULM6 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Uspl1Q3ULM6 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC23.23■■□□□ 1.31
Uspl1Q3ULM6 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Uspl1Q3ULM6 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Uspl1Q3ULM6 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Uspl1Q3ULM6 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Uspl1Q3ULM6 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Uspl1Q3ULM6 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Uspl1Q3ULM6 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Uspl1Q3ULM6 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC23.22■■□□□ 1.31
Uspl1Q3ULM6 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Uspl1Q3ULM6 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Uspl1Q3ULM6 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Uspl1Q3ULM6 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Uspl1Q3ULM6 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Uspl1Q3ULM6 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Uspl1Q3ULM6 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Uspl1Q3ULM6 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Uspl1Q3ULM6 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Uspl1Q3ULM6 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Uspl1Q3ULM6 Gm42545-201ENSMUST00000202755 922 ntBASIC23.21■■□□□ 1.31
Uspl1Q3ULM6 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Uspl1Q3ULM6 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Uspl1Q3ULM6 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Uspl1Q3ULM6 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC23.21■■□□□ 1.31
Uspl1Q3ULM6 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Uspl1Q3ULM6 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Uspl1Q3ULM6 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
Uspl1Q3ULM6 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Uspl1Q3ULM6 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC23.2■■□□□ 1.3
Uspl1Q3ULM6 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
Uspl1Q3ULM6 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Uspl1Q3ULM6 Gm37292-201ENSMUST00000192062 758 ntBASIC23.2■■□□□ 1.3
Uspl1Q3ULM6 AC166341.7-201ENSMUST00000221698 126 ntBASIC23.2■■□□□ 1.3
Uspl1Q3ULM6 Spcs1-207ENSMUST00000228767 1008 ntBASIC23.2■■□□□ 1.3
Uspl1Q3ULM6 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Uspl1Q3ULM6 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Uspl1Q3ULM6 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Uspl1Q3ULM6 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Uspl1Q3ULM6 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Uspl1Q3ULM6 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Uspl1Q3ULM6 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Uspl1Q3ULM6 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Uspl1Q3ULM6 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Uspl1Q3ULM6 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Uspl1Q3ULM6 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Uspl1Q3ULM6 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC23.19■■□□□ 1.3
Uspl1Q3ULM6 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Uspl1Q3ULM6 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Uspl1Q3ULM6 Gm8520-201ENSMUST00000186517 868 ntBASIC23.19■■□□□ 1.3
Uspl1Q3ULM6 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Uspl1Q3ULM6 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Uspl1Q3ULM6 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Uspl1Q3ULM6 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Uspl1Q3ULM6 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Uspl1Q3ULM6 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Uspl1Q3ULM6 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Uspl1Q3ULM6 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Uspl1Q3ULM6 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Uspl1Q3ULM6 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Uspl1Q3ULM6 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Uspl1Q3ULM6 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Uspl1Q3ULM6 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Uspl1Q3ULM6 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Uspl1Q3ULM6 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Uspl1Q3ULM6 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Uspl1Q3ULM6 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC23.17■■□□□ 1.3
Uspl1Q3ULM6 Gm13401-201ENSMUST00000117074 291 ntBASIC23.17■■□□□ 1.3
Uspl1Q3ULM6 Gm11643-201ENSMUST00000119578 864 ntBASIC23.17■■□□□ 1.3
Uspl1Q3ULM6 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC23.17■■□□□ 1.3
Uspl1Q3ULM6 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Uspl1Q3ULM6 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Uspl1Q3ULM6 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Uspl1Q3ULM6 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Uspl1Q3ULM6 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Uspl1Q3ULM6 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Uspl1Q3ULM6 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 101.5 ms