Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.91■□□□□ 0.3
Brf2Q3UAW9 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Brf2Q3UAW9 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.91■□□□□ 0.3
Brf2Q3UAW9 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Brf2Q3UAW9 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Brf2Q3UAW9 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Brf2Q3UAW9 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Brf2Q3UAW9 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Brf2Q3UAW9 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Brf2Q3UAW9 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Brf2Q3UAW9 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
Brf2Q3UAW9 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Brf2Q3UAW9 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Brf2Q3UAW9 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Brf2Q3UAW9 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Brf2Q3UAW9 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Brf2Q3UAW9 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Brf2Q3UAW9 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Brf2Q3UAW9 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.9■□□□□ 0.3
Brf2Q3UAW9 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Brf2Q3UAW9 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Brf2Q3UAW9 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Brf2Q3UAW9 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Brf2Q3UAW9 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Brf2Q3UAW9 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Brf2Q3UAW9 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Brf2Q3UAW9 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Brf2Q3UAW9 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.9■□□□□ 0.3
Brf2Q3UAW9 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Brf2Q3UAW9 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Brf2Q3UAW9 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Brf2Q3UAW9 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Brf2Q3UAW9 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Brf2Q3UAW9 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Brf2Q3UAW9 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Brf2Q3UAW9 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Brf2Q3UAW9 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Brf2Q3UAW9 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Brf2Q3UAW9 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.89■□□□□ 0.29
Brf2Q3UAW9 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Brf2Q3UAW9 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Brf2Q3UAW9 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.89■□□□□ 0.29
Brf2Q3UAW9 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.89■□□□□ 0.29
Brf2Q3UAW9 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Brf2Q3UAW9 Gm15039-201ENSMUST00000118914 875 ntBASIC16.89■□□□□ 0.29
Brf2Q3UAW9 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Brf2Q3UAW9 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Brf2Q3UAW9 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Brf2Q3UAW9 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Brf2Q3UAW9 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Brf2Q3UAW9 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Brf2Q3UAW9 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.89■□□□□ 0.29
Brf2Q3UAW9 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.88■□□□□ 0.29
Brf2Q3UAW9 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.88■□□□□ 0.29
Brf2Q3UAW9 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Brf2Q3UAW9 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Brf2Q3UAW9 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.88■□□□□ 0.29
Brf2Q3UAW9 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Brf2Q3UAW9 Mir5133-201ENSMUST00000174955 77 ntBASIC16.88■□□□□ 0.29
Brf2Q3UAW9 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Brf2Q3UAW9 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.88■□□□□ 0.29
Brf2Q3UAW9 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.88■□□□□ 0.29
Brf2Q3UAW9 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Brf2Q3UAW9 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Brf2Q3UAW9 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Brf2Q3UAW9 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Brf2Q3UAW9 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Brf2Q3UAW9 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Brf2Q3UAW9 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Brf2Q3UAW9 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Brf2Q3UAW9 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Brf2Q3UAW9 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Brf2Q3UAW9 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Brf2Q3UAW9 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Brf2Q3UAW9 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Brf2Q3UAW9 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.87■□□□□ 0.29
Brf2Q3UAW9 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Brf2Q3UAW9 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Brf2Q3UAW9 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
Brf2Q3UAW9 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Brf2Q3UAW9 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Brf2Q3UAW9 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Brf2Q3UAW9 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Brf2Q3UAW9 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Brf2Q3UAW9 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.86■□□□□ 0.29
Brf2Q3UAW9 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.86■□□□□ 0.29
Brf2Q3UAW9 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Brf2Q3UAW9 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Brf2Q3UAW9 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Brf2Q3UAW9 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Brf2Q3UAW9 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Brf2Q3UAW9 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Brf2Q3UAW9 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Brf2Q3UAW9 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Brf2Q3UAW9 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC16.85■□□□□ 0.29
Brf2Q3UAW9 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Brf2Q3UAW9 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.85■□□□□ 0.29
Brf2Q3UAW9 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Brf2Q3UAW9 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.85■□□□□ 0.29
Brf2Q3UAW9 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms