Protein–RNA interactions for Protein: A0A140LIP3

4933424G06Rik, RIKEN cDNA 4933424G06 gene, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933424G06RikA0A140LIP3 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
4933424G06RikA0A140LIP3 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
4933424G06RikA0A140LIP3 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
4933424G06RikA0A140LIP3 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.34■□□□□ 0.53
4933424G06RikA0A140LIP3 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
4933424G06RikA0A140LIP3 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
4933424G06RikA0A140LIP3 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.34■□□□□ 0.53
4933424G06RikA0A140LIP3 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.34■□□□□ 0.53
4933424G06RikA0A140LIP3 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.34■□□□□ 0.53
4933424G06RikA0A140LIP3 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
4933424G06RikA0A140LIP3 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
4933424G06RikA0A140LIP3 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
4933424G06RikA0A140LIP3 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.34■□□□□ 0.53
4933424G06RikA0A140LIP3 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
4933424G06RikA0A140LIP3 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
4933424G06RikA0A140LIP3 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
4933424G06RikA0A140LIP3 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
4933424G06RikA0A140LIP3 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
4933424G06RikA0A140LIP3 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
4933424G06RikA0A140LIP3 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
4933424G06RikA0A140LIP3 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
4933424G06RikA0A140LIP3 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
4933424G06RikA0A140LIP3 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
4933424G06RikA0A140LIP3 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
4933424G06RikA0A140LIP3 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
4933424G06RikA0A140LIP3 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
4933424G06RikA0A140LIP3 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
4933424G06RikA0A140LIP3 Mir6349-201ENSMUST00000184059 97 ntBASIC18.33■□□□□ 0.52
4933424G06RikA0A140LIP3 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.33■□□□□ 0.52
4933424G06RikA0A140LIP3 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
4933424G06RikA0A140LIP3 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
4933424G06RikA0A140LIP3 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
4933424G06RikA0A140LIP3 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
4933424G06RikA0A140LIP3 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
4933424G06RikA0A140LIP3 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.33■□□□□ 0.52
4933424G06RikA0A140LIP3 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
4933424G06RikA0A140LIP3 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.33■□□□□ 0.52
4933424G06RikA0A140LIP3 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
4933424G06RikA0A140LIP3 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.32■□□□□ 0.52
4933424G06RikA0A140LIP3 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.32■□□□□ 0.52
4933424G06RikA0A140LIP3 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.32■□□□□ 0.52
4933424G06RikA0A140LIP3 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
4933424G06RikA0A140LIP3 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
4933424G06RikA0A140LIP3 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
4933424G06RikA0A140LIP3 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
4933424G06RikA0A140LIP3 Gm12382-201ENSMUST00000122005 922 ntBASIC18.32■□□□□ 0.52
4933424G06RikA0A140LIP3 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.32■□□□□ 0.52
4933424G06RikA0A140LIP3 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
4933424G06RikA0A140LIP3 Mir5122-201ENSMUST00000175004 89 ntBASIC18.32■□□□□ 0.52
4933424G06RikA0A140LIP3 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.32■□□□□ 0.52
4933424G06RikA0A140LIP3 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.32■□□□□ 0.52
4933424G06RikA0A140LIP3 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
4933424G06RikA0A140LIP3 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.32■□□□□ 0.52
4933424G06RikA0A140LIP3 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
4933424G06RikA0A140LIP3 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
4933424G06RikA0A140LIP3 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
4933424G06RikA0A140LIP3 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
4933424G06RikA0A140LIP3 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
4933424G06RikA0A140LIP3 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
4933424G06RikA0A140LIP3 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.31■□□□□ 0.52
4933424G06RikA0A140LIP3 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
4933424G06RikA0A140LIP3 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
4933424G06RikA0A140LIP3 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.31■□□□□ 0.52
4933424G06RikA0A140LIP3 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.31■□□□□ 0.52
4933424G06RikA0A140LIP3 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
4933424G06RikA0A140LIP3 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
4933424G06RikA0A140LIP3 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
4933424G06RikA0A140LIP3 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
4933424G06RikA0A140LIP3 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.31■□□□□ 0.52
4933424G06RikA0A140LIP3 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
4933424G06RikA0A140LIP3 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
4933424G06RikA0A140LIP3 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
4933424G06RikA0A140LIP3 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
4933424G06RikA0A140LIP3 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
4933424G06RikA0A140LIP3 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
4933424G06RikA0A140LIP3 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.3■□□□□ 0.52
4933424G06RikA0A140LIP3 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
4933424G06RikA0A140LIP3 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.3■□□□□ 0.52
4933424G06RikA0A140LIP3 Gm15565-201ENSMUST00000118890 427 ntBASIC18.3■□□□□ 0.52
4933424G06RikA0A140LIP3 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.3■□□□□ 0.52
4933424G06RikA0A140LIP3 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
4933424G06RikA0A140LIP3 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
4933424G06RikA0A140LIP3 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
4933424G06RikA0A140LIP3 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.3■□□□□ 0.52
4933424G06RikA0A140LIP3 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
4933424G06RikA0A140LIP3 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
4933424G06RikA0A140LIP3 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
4933424G06RikA0A140LIP3 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
4933424G06RikA0A140LIP3 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
4933424G06RikA0A140LIP3 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
4933424G06RikA0A140LIP3 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.29■□□□□ 0.52
4933424G06RikA0A140LIP3 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
4933424G06RikA0A140LIP3 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
4933424G06RikA0A140LIP3 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.29■□□□□ 0.52
4933424G06RikA0A140LIP3 Gm13836-201ENSMUST00000121159 501 ntBASIC18.29■□□□□ 0.52
4933424G06RikA0A140LIP3 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
4933424G06RikA0A140LIP3 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.29■□□□□ 0.52
4933424G06RikA0A140LIP3 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
4933424G06RikA0A140LIP3 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
4933424G06RikA0A140LIP3 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms