Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hmgn5Q9JL35 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hmgn5Q9JL35 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Hmgn5Q9JL35 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hmgn5Q9JL35 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC20.28■□□□□ 0.84
Hmgn5Q9JL35 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Hmgn5Q9JL35 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Hmgn5Q9JL35 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.28■□□□□ 0.84
Hmgn5Q9JL35 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hmgn5Q9JL35 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Hmgn5Q9JL35 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hmgn5Q9JL35 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.28■□□□□ 0.84
Hmgn5Q9JL35 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.28■□□□□ 0.84
Hmgn5Q9JL35 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hmgn5Q9JL35 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hmgn5Q9JL35 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hmgn5Q9JL35 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC20.27■□□□□ 0.84
Hmgn5Q9JL35 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hmgn5Q9JL35 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Hmgn5Q9JL35 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.27■□□□□ 0.84
Hmgn5Q9JL35 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Hmgn5Q9JL35 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hmgn5Q9JL35 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.27■□□□□ 0.84
Hmgn5Q9JL35 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Hmgn5Q9JL35 Gm12251-201ENSMUST00000117893 792 ntBASIC20.27■□□□□ 0.84
Hmgn5Q9JL35 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hmgn5Q9JL35 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Hmgn5Q9JL35 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hmgn5Q9JL35 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hmgn5Q9JL35 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hmgn5Q9JL35 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hmgn5Q9JL35 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Hmgn5Q9JL35 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Hmgn5Q9JL35 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Hmgn5Q9JL35 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Hmgn5Q9JL35 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hmgn5Q9JL35 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hmgn5Q9JL35 Cxcl14-202ENSMUST00000224801 1467 ntBASIC20.26■□□□□ 0.83
Hmgn5Q9JL35 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Hmgn5Q9JL35 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.26■□□□□ 0.83
Hmgn5Q9JL35 Gm43137-201ENSMUST00000198052 594 ntBASIC20.26■□□□□ 0.83
Hmgn5Q9JL35 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hmgn5Q9JL35 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.26■□□□□ 0.83
Hmgn5Q9JL35 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hmgn5Q9JL35 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hmgn5Q9JL35 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hmgn5Q9JL35 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Hmgn5Q9JL35 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Hmgn5Q9JL35 Gm43338-201ENSMUST00000198617 2223 ntBASIC20.26■□□□□ 0.83
Hmgn5Q9JL35 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hmgn5Q9JL35 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC20.25■□□□□ 0.83
Hmgn5Q9JL35 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hmgn5Q9JL35 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Hmgn5Q9JL35 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hmgn5Q9JL35 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Hmgn5Q9JL35 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
Hmgn5Q9JL35 Smad6-203ENSMUST00000179458 273 ntBASIC20.25■□□□□ 0.83
Hmgn5Q9JL35 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.25■□□□□ 0.83
Hmgn5Q9JL35 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Hmgn5Q9JL35 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hmgn5Q9JL35 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hmgn5Q9JL35 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.25■□□□□ 0.83
Hmgn5Q9JL35 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hmgn5Q9JL35 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hmgn5Q9JL35 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hmgn5Q9JL35 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Hmgn5Q9JL35 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Hmgn5Q9JL35 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hmgn5Q9JL35 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Hmgn5Q9JL35 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hmgn5Q9JL35 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hmgn5Q9JL35 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Hmgn5Q9JL35 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hmgn5Q9JL35 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
Hmgn5Q9JL35 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hmgn5Q9JL35 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hmgn5Q9JL35 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.24■□□□□ 0.83
Hmgn5Q9JL35 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hmgn5Q9JL35 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hmgn5Q9JL35 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hmgn5Q9JL35 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Hmgn5Q9JL35 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Hmgn5Q9JL35 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hmgn5Q9JL35 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Hmgn5Q9JL35 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Hmgn5Q9JL35 Gm45102-201ENSMUST00000207427 857 ntBASIC20.23■□□□□ 0.83
Hmgn5Q9JL35 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.23■□□□□ 0.83
Hmgn5Q9JL35 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hmgn5Q9JL35 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hmgn5Q9JL35 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Hmgn5Q9JL35 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
Hmgn5Q9JL35 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hmgn5Q9JL35 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hmgn5Q9JL35 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Hmgn5Q9JL35 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Hmgn5Q9JL35 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Hmgn5Q9JL35 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hmgn5Q9JL35 Gm37374-201ENSMUST00000194954 1829 ntBASIC20.23■□□□□ 0.83
Hmgn5Q9JL35 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Hmgn5Q9JL35 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms