Protein–RNA interactions for Protein: Q8VE18

Smg8, Protein SMG8, mousemouse

Predictions only

Length 991 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg8Q8VE18 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smg8Q8VE18 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smg8Q8VE18 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smg8Q8VE18 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smg8Q8VE18 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smg8Q8VE18 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smg8Q8VE18 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smg8Q8VE18 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Smg8Q8VE18 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smg8Q8VE18 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smg8Q8VE18 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.21■□□□□ 0.67
Smg8Q8VE18 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Smg8Q8VE18 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.21■□□□□ 0.67
Smg8Q8VE18 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.21■□□□□ 0.67
Smg8Q8VE18 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smg8Q8VE18 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smg8Q8VE18 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smg8Q8VE18 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smg8Q8VE18 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Smg8Q8VE18 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smg8Q8VE18 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smg8Q8VE18 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Smg8Q8VE18 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smg8Q8VE18 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Smg8Q8VE18 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Smg8Q8VE18 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Smg8Q8VE18 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Smg8Q8VE18 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smg8Q8VE18 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smg8Q8VE18 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Smg8Q8VE18 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Smg8Q8VE18 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Smg8Q8VE18 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.2■□□□□ 0.66
Smg8Q8VE18 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.2■□□□□ 0.66
Smg8Q8VE18 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smg8Q8VE18 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smg8Q8VE18 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smg8Q8VE18 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smg8Q8VE18 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smg8Q8VE18 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smg8Q8VE18 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smg8Q8VE18 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smg8Q8VE18 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Smg8Q8VE18 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.19■□□□□ 0.66
Smg8Q8VE18 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smg8Q8VE18 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smg8Q8VE18 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smg8Q8VE18 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smg8Q8VE18 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smg8Q8VE18 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.18■□□□□ 0.66
Smg8Q8VE18 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smg8Q8VE18 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.18■□□□□ 0.66
Smg8Q8VE18 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smg8Q8VE18 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Smg8Q8VE18 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smg8Q8VE18 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Smg8Q8VE18 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.18■□□□□ 0.66
Smg8Q8VE18 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smg8Q8VE18 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Smg8Q8VE18 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.18■□□□□ 0.66
Smg8Q8VE18 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smg8Q8VE18 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smg8Q8VE18 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smg8Q8VE18 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smg8Q8VE18 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smg8Q8VE18 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smg8Q8VE18 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smg8Q8VE18 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.17■□□□□ 0.66
Smg8Q8VE18 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.17■□□□□ 0.66
Smg8Q8VE18 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smg8Q8VE18 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Smg8Q8VE18 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smg8Q8VE18 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smg8Q8VE18 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.17■□□□□ 0.66
Smg8Q8VE18 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smg8Q8VE18 Gm7977-201ENSMUST00000193787 748 ntBASIC19.17■□□□□ 0.66
Smg8Q8VE18 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.17■□□□□ 0.66
Smg8Q8VE18 Gm43799-201ENSMUST00000201845 579 ntBASIC19.17■□□□□ 0.66
Smg8Q8VE18 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.17■□□□□ 0.66
Smg8Q8VE18 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.17■□□□□ 0.66
Smg8Q8VE18 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smg8Q8VE18 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smg8Q8VE18 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smg8Q8VE18 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smg8Q8VE18 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smg8Q8VE18 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smg8Q8VE18 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smg8Q8VE18 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smg8Q8VE18 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smg8Q8VE18 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smg8Q8VE18 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Smg8Q8VE18 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smg8Q8VE18 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Smg8Q8VE18 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smg8Q8VE18 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.16■□□□□ 0.66
Smg8Q8VE18 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smg8Q8VE18 Odf3b-204ENSMUST00000227834 930 ntBASIC19.16■□□□□ 0.66
Smg8Q8VE18 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smg8Q8VE18 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Smg8Q8VE18 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms