Protein–RNA interactions for Protein: Q66JQ7

Knl1, Kinetochore scaffold 1, mousemouse

Predictions only

Length 1,612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Knl1Q66JQ7 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Knl1Q66JQ7 Gm9694-201ENSMUST00000193347 1189 ntBASIC25.56■■□□□ 1.68
Knl1Q66JQ7 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Knl1Q66JQ7 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Knl1Q66JQ7 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC25.56■■□□□ 1.68
Knl1Q66JQ7 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC25.56■■□□□ 1.68
Knl1Q66JQ7 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Knl1Q66JQ7 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
Knl1Q66JQ7 Gm25925-201ENSMUST00000158314 306 ntBASIC25.55■■□□□ 1.68
Knl1Q66JQ7 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
Knl1Q66JQ7 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Knl1Q66JQ7 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
Knl1Q66JQ7 Spsb2-203ENSMUST00000112473 1322 ntBASIC25.55■■□□□ 1.68
Knl1Q66JQ7 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Knl1Q66JQ7 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC25.55■■□□□ 1.68
Knl1Q66JQ7 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Knl1Q66JQ7 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC25.55■■□□□ 1.68
Knl1Q66JQ7 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Knl1Q66JQ7 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Knl1Q66JQ7 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC25.55■■□□□ 1.68
Knl1Q66JQ7 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
Knl1Q66JQ7 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Knl1Q66JQ7 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Knl1Q66JQ7 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Knl1Q66JQ7 Gm24841-201ENSMUST00000158676 357 ntBASIC25.54■■□□□ 1.68
Knl1Q66JQ7 Gm18115-201ENSMUST00000221209 621 ntBASIC25.54■■□□□ 1.68
Knl1Q66JQ7 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Knl1Q66JQ7 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Knl1Q66JQ7 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Knl1Q66JQ7 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC25.53■■□□□ 1.68
Knl1Q66JQ7 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
Knl1Q66JQ7 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
Knl1Q66JQ7 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC25.53■■□□□ 1.68
Knl1Q66JQ7 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Knl1Q66JQ7 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
Knl1Q66JQ7 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Knl1Q66JQ7 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC25.52■■□□□ 1.68
Knl1Q66JQ7 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Knl1Q66JQ7 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Knl1Q66JQ7 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Knl1Q66JQ7 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Knl1Q66JQ7 Gm24589-201ENSMUST00000116692 94 ntBASIC25.52■■□□□ 1.68
Knl1Q66JQ7 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC25.52■■□□□ 1.68
Knl1Q66JQ7 Gm34391-201ENSMUST00000203706 907 ntBASIC25.52■■□□□ 1.68
Knl1Q66JQ7 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC25.52■■□□□ 1.68
Knl1Q66JQ7 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC25.52■■□□□ 1.68
Knl1Q66JQ7 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Knl1Q66JQ7 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC25.51■■□□□ 1.68
Knl1Q66JQ7 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC25.51■■□□□ 1.67
Knl1Q66JQ7 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Knl1Q66JQ7 Gm9194-201ENSMUST00000220749 1447 ntBASIC25.51■■□□□ 1.67
Knl1Q66JQ7 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Knl1Q66JQ7 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
Knl1Q66JQ7 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Knl1Q66JQ7 Mir3081-201ENSMUST00000175305 84 ntBASIC25.51■■□□□ 1.67
Knl1Q66JQ7 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC25.51■■□□□ 1.67
Knl1Q66JQ7 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Knl1Q66JQ7 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC25.5■■□□□ 1.67
Knl1Q66JQ7 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Knl1Q66JQ7 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC25.5■■□□□ 1.67
Knl1Q66JQ7 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Knl1Q66JQ7 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC25.5■■□□□ 1.67
Knl1Q66JQ7 Mzt1-203ENSMUST00000227948 952 ntBASIC25.5■■□□□ 1.67
Knl1Q66JQ7 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Knl1Q66JQ7 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Knl1Q66JQ7 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Knl1Q66JQ7 Gm38160-201ENSMUST00000193090 2499 ntBASIC25.5■■□□□ 1.67
Knl1Q66JQ7 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Knl1Q66JQ7 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Knl1Q66JQ7 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC25.49■■□□□ 1.67
Knl1Q66JQ7 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Knl1Q66JQ7 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC25.49■■□□□ 1.67
Knl1Q66JQ7 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC25.49■■□□□ 1.67
Knl1Q66JQ7 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Knl1Q66JQ7 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
Knl1Q66JQ7 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Knl1Q66JQ7 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
Knl1Q66JQ7 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC25.49■■□□□ 1.67
Knl1Q66JQ7 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Knl1Q66JQ7 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC25.49■■□□□ 1.67
Knl1Q66JQ7 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Knl1Q66JQ7 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
Knl1Q66JQ7 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Knl1Q66JQ7 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC25.48■■□□□ 1.67
Knl1Q66JQ7 Otx2os1-206ENSMUST00000228153 787 ntBASIC25.48■■□□□ 1.67
Knl1Q66JQ7 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC25.48■■□□□ 1.67
Knl1Q66JQ7 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
Knl1Q66JQ7 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
Knl1Q66JQ7 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Knl1Q66JQ7 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
Knl1Q66JQ7 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC25.48■■□□□ 1.67
Knl1Q66JQ7 Gm13401-201ENSMUST00000117074 291 ntBASIC25.48■■□□□ 1.67
Knl1Q66JQ7 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC25.48■■□□□ 1.67
Knl1Q66JQ7 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Knl1Q66JQ7 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC25.48■■□□□ 1.67
Knl1Q66JQ7 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
Knl1Q66JQ7 Gm7213-201ENSMUST00000215977 950 ntBASIC25.48■■□□□ 1.67
Knl1Q66JQ7 AC164629.2-201ENSMUST00000217916 270 ntBASIC25.48■■□□□ 1.67
Knl1Q66JQ7 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Knl1Q66JQ7 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 100 ms