Protein–RNA interactions for Protein: Q61116

Znf235, Zinc finger protein 235, mousemouse

Predictions only

Length 645 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf235Q61116 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Znf235Q61116 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Znf235Q61116 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Znf235Q61116 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Znf235Q61116 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Znf235Q61116 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Znf235Q61116 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.91■□□□□ 0.62
Znf235Q61116 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Znf235Q61116 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Znf235Q61116 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Znf235Q61116 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Znf235Q61116 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Znf235Q61116 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Znf235Q61116 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Znf235Q61116 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Znf235Q61116 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Znf235Q61116 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Znf235Q61116 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
Znf235Q61116 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.9■□□□□ 0.62
Znf235Q61116 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Znf235Q61116 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Znf235Q61116 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Znf235Q61116 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Znf235Q61116 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Znf235Q61116 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Znf235Q61116 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.62
Znf235Q61116 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Znf235Q61116 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.89■□□□□ 0.61
Znf235Q61116 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Znf235Q61116 Timm23-208ENSMUST00000226683 750 ntBASIC18.89■□□□□ 0.61
Znf235Q61116 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Znf235Q61116 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Znf235Q61116 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Znf235Q61116 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Znf235Q61116 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Znf235Q61116 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Znf235Q61116 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Znf235Q61116 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Znf235Q61116 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Znf235Q61116 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.89■□□□□ 0.61
Znf235Q61116 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.88■□□□□ 0.61
Znf235Q61116 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Znf235Q61116 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Znf235Q61116 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.88■□□□□ 0.61
Znf235Q61116 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Znf235Q61116 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.88■□□□□ 0.61
Znf235Q61116 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Znf235Q61116 Fst-202ENSMUST00000223640 2612 ntBASIC18.88■□□□□ 0.61
Znf235Q61116 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Znf235Q61116 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Znf235Q61116 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Znf235Q61116 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Znf235Q61116 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Znf235Q61116 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Znf235Q61116 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.88■□□□□ 0.61
Znf235Q61116 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Znf235Q61116 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Znf235Q61116 Gm13401-201ENSMUST00000117074 291 ntBASIC18.87■□□□□ 0.61
Znf235Q61116 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.87■□□□□ 0.61
Znf235Q61116 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.87■□□□□ 0.61
Znf235Q61116 Gm10517-202ENSMUST00000192970 758 ntBASIC18.87■□□□□ 0.61
Znf235Q61116 Gm43799-201ENSMUST00000201845 579 ntBASIC18.87■□□□□ 0.61
Znf235Q61116 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Znf235Q61116 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Znf235Q61116 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Znf235Q61116 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Znf235Q61116 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.86■□□□□ 0.61
Znf235Q61116 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Znf235Q61116 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Znf235Q61116 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Znf235Q61116 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Znf235Q61116 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Znf235Q61116 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.86■□□□□ 0.61
Znf235Q61116 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Znf235Q61116 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Znf235Q61116 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.86■□□□□ 0.61
Znf235Q61116 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.86■□□□□ 0.61
Znf235Q61116 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Znf235Q61116 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Znf235Q61116 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Znf235Q61116 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Znf235Q61116 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Znf235Q61116 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Znf235Q61116 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Znf235Q61116 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Znf235Q61116 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Znf235Q61116 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Znf235Q61116 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Znf235Q61116 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Znf235Q61116 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Znf235Q61116 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Znf235Q61116 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Znf235Q61116 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Znf235Q61116 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Znf235Q61116 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Znf235Q61116 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Znf235Q61116 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Znf235Q61116 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Znf235Q61116 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Znf235Q61116 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms