Protein–RNA interactions for Protein: P41230

Kdm5c, Lysine-specific demethylase 5C, mousemouse

Predictions only

Length 1,554 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm5cP41230 Gm24841-201ENSMUST00000158676 357 ntBASIC26.3■■□□□ 1.8
Kdm5cP41230 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Kdm5cP41230 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Kdm5cP41230 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
Kdm5cP41230 Gm15853-202ENSMUST00000195518 2041 ntBASIC26.3■■□□□ 1.8
Kdm5cP41230 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Kdm5cP41230 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Kdm5cP41230 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Kdm5cP41230 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Kdm5cP41230 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC26.3■■□□□ 1.8
Kdm5cP41230 Gm13401-201ENSMUST00000117074 291 ntBASIC26.29■■□□□ 1.8
Kdm5cP41230 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC26.29■■□□□ 1.8
Kdm5cP41230 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC26.29■■□□□ 1.8
Kdm5cP41230 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC26.29■■□□□ 1.8
Kdm5cP41230 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Kdm5cP41230 Gm9694-201ENSMUST00000193347 1189 ntBASIC26.29■■□□□ 1.8
Kdm5cP41230 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Kdm5cP41230 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Kdm5cP41230 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Kdm5cP41230 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
Kdm5cP41230 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Kdm5cP41230 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
Kdm5cP41230 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
Kdm5cP41230 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Kdm5cP41230 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Kdm5cP41230 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC26.28■■□□□ 1.8
Kdm5cP41230 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
Kdm5cP41230 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
Kdm5cP41230 AC133598.3-202ENSMUST00000224219 531 ntBASIC26.28■■□□□ 1.8
Kdm5cP41230 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
Kdm5cP41230 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Kdm5cP41230 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC26.28■■□□□ 1.8
Kdm5cP41230 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Kdm5cP41230 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Kdm5cP41230 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Kdm5cP41230 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Kdm5cP41230 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Kdm5cP41230 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
Kdm5cP41230 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Kdm5cP41230 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC26.27■■□□□ 1.8
Kdm5cP41230 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.8
Kdm5cP41230 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Kdm5cP41230 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Kdm5cP41230 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Kdm5cP41230 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Kdm5cP41230 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
Kdm5cP41230 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC26.26■■□□□ 1.79
Kdm5cP41230 Gm18958-201ENSMUST00000174258 762 ntBASIC26.25■■□□□ 1.79
Kdm5cP41230 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC26.25■■□□□ 1.79
Kdm5cP41230 Gm27389-201ENSMUST00000183622 195 ntBASIC26.25■■□□□ 1.79
Kdm5cP41230 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Kdm5cP41230 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Kdm5cP41230 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Kdm5cP41230 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Kdm5cP41230 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Kdm5cP41230 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Kdm5cP41230 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Kdm5cP41230 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC26.25■■□□□ 1.79
Kdm5cP41230 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
Kdm5cP41230 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Kdm5cP41230 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Kdm5cP41230 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC26.24■■□□□ 1.79
Kdm5cP41230 Spsb2-203ENSMUST00000112473 1322 ntBASIC26.24■■□□□ 1.79
Kdm5cP41230 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Kdm5cP41230 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Kdm5cP41230 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Kdm5cP41230 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
Kdm5cP41230 Gm11950-201ENSMUST00000121615 838 ntBASIC26.24■■□□□ 1.79
Kdm5cP41230 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC26.24■■□□□ 1.79
Kdm5cP41230 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC26.24■■□□□ 1.79
Kdm5cP41230 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Kdm5cP41230 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC26.24■■□□□ 1.79
Kdm5cP41230 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
Kdm5cP41230 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Kdm5cP41230 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC26.23■■□□□ 1.79
Kdm5cP41230 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Kdm5cP41230 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
Kdm5cP41230 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Kdm5cP41230 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Kdm5cP41230 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
Kdm5cP41230 Gm9731-201ENSMUST00000209480 747 ntBASIC26.23■■□□□ 1.79
Kdm5cP41230 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
Kdm5cP41230 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Kdm5cP41230 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Kdm5cP41230 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Kdm5cP41230 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Kdm5cP41230 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC26.22■■□□□ 1.79
Kdm5cP41230 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
Kdm5cP41230 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Kdm5cP41230 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Kdm5cP41230 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Kdm5cP41230 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC26.22■■□□□ 1.79
Kdm5cP41230 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
Kdm5cP41230 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Kdm5cP41230 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Kdm5cP41230 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Kdm5cP41230 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Kdm5cP41230 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Kdm5cP41230 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Kdm5cP41230 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms