Protein–RNA interactions for Protein: A0A140LIP3

4933424G06Rik, RIKEN cDNA 4933424G06 gene, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933424G06RikA0A140LIP3 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
4933424G06RikA0A140LIP3 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.41■□□□□ 0.54
4933424G06RikA0A140LIP3 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
4933424G06RikA0A140LIP3 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.41■□□□□ 0.54
4933424G06RikA0A140LIP3 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
4933424G06RikA0A140LIP3 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
4933424G06RikA0A140LIP3 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
4933424G06RikA0A140LIP3 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.41■□□□□ 0.54
4933424G06RikA0A140LIP3 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.41■□□□□ 0.54
4933424G06RikA0A140LIP3 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
4933424G06RikA0A140LIP3 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
4933424G06RikA0A140LIP3 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
4933424G06RikA0A140LIP3 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
4933424G06RikA0A140LIP3 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
4933424G06RikA0A140LIP3 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
4933424G06RikA0A140LIP3 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
4933424G06RikA0A140LIP3 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
4933424G06RikA0A140LIP3 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
4933424G06RikA0A140LIP3 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
4933424G06RikA0A140LIP3 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
4933424G06RikA0A140LIP3 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
4933424G06RikA0A140LIP3 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
4933424G06RikA0A140LIP3 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
4933424G06RikA0A140LIP3 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.4■□□□□ 0.54
4933424G06RikA0A140LIP3 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
4933424G06RikA0A140LIP3 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
4933424G06RikA0A140LIP3 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
4933424G06RikA0A140LIP3 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
4933424G06RikA0A140LIP3 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
4933424G06RikA0A140LIP3 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
4933424G06RikA0A140LIP3 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
4933424G06RikA0A140LIP3 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
4933424G06RikA0A140LIP3 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
4933424G06RikA0A140LIP3 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.39■□□□□ 0.54
4933424G06RikA0A140LIP3 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
4933424G06RikA0A140LIP3 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
4933424G06RikA0A140LIP3 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
4933424G06RikA0A140LIP3 Gm37055-201ENSMUST00000191866 133 ntBASIC18.39■□□□□ 0.53
4933424G06RikA0A140LIP3 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.39■□□□□ 0.53
4933424G06RikA0A140LIP3 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
4933424G06RikA0A140LIP3 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
4933424G06RikA0A140LIP3 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
4933424G06RikA0A140LIP3 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
4933424G06RikA0A140LIP3 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
4933424G06RikA0A140LIP3 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
4933424G06RikA0A140LIP3 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
4933424G06RikA0A140LIP3 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
4933424G06RikA0A140LIP3 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
4933424G06RikA0A140LIP3 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
4933424G06RikA0A140LIP3 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.38■□□□□ 0.53
4933424G06RikA0A140LIP3 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
4933424G06RikA0A140LIP3 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.38■□□□□ 0.53
4933424G06RikA0A140LIP3 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
4933424G06RikA0A140LIP3 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
4933424G06RikA0A140LIP3 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
4933424G06RikA0A140LIP3 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
4933424G06RikA0A140LIP3 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
4933424G06RikA0A140LIP3 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
4933424G06RikA0A140LIP3 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.38■□□□□ 0.53
4933424G06RikA0A140LIP3 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.38■□□□□ 0.53
4933424G06RikA0A140LIP3 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
4933424G06RikA0A140LIP3 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
4933424G06RikA0A140LIP3 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
4933424G06RikA0A140LIP3 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
4933424G06RikA0A140LIP3 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
4933424G06RikA0A140LIP3 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
4933424G06RikA0A140LIP3 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.37■□□□□ 0.53
4933424G06RikA0A140LIP3 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
4933424G06RikA0A140LIP3 Gm18025-201ENSMUST00000221733 862 ntBASIC18.37■□□□□ 0.53
4933424G06RikA0A140LIP3 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
4933424G06RikA0A140LIP3 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
4933424G06RikA0A140LIP3 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
4933424G06RikA0A140LIP3 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
4933424G06RikA0A140LIP3 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.37■□□□□ 0.53
4933424G06RikA0A140LIP3 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
4933424G06RikA0A140LIP3 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
4933424G06RikA0A140LIP3 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.36■□□□□ 0.53
4933424G06RikA0A140LIP3 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.36■□□□□ 0.53
4933424G06RikA0A140LIP3 Gm43183-201ENSMUST00000200632 547 ntBASIC18.36■□□□□ 0.53
4933424G06RikA0A140LIP3 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
4933424G06RikA0A140LIP3 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
4933424G06RikA0A140LIP3 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
4933424G06RikA0A140LIP3 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
4933424G06RikA0A140LIP3 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
4933424G06RikA0A140LIP3 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
4933424G06RikA0A140LIP3 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
4933424G06RikA0A140LIP3 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
4933424G06RikA0A140LIP3 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
4933424G06RikA0A140LIP3 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
4933424G06RikA0A140LIP3 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
4933424G06RikA0A140LIP3 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
4933424G06RikA0A140LIP3 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
4933424G06RikA0A140LIP3 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
4933424G06RikA0A140LIP3 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
4933424G06RikA0A140LIP3 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
4933424G06RikA0A140LIP3 Gm42545-201ENSMUST00000202755 922 ntBASIC18.35■□□□□ 0.53
4933424G06RikA0A140LIP3 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
4933424G06RikA0A140LIP3 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
4933424G06RikA0A140LIP3 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
4933424G06RikA0A140LIP3 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms