Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rsph3bQ9DA80 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.77■□□□□ 0.76
Rsph3bQ9DA80 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rsph3bQ9DA80 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rsph3bQ9DA80 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rsph3bQ9DA80 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rsph3bQ9DA80 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rsph3bQ9DA80 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
Rsph3bQ9DA80 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.77■□□□□ 0.75
Rsph3bQ9DA80 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Rsph3bQ9DA80 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rsph3bQ9DA80 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rsph3bQ9DA80 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.76■□□□□ 0.75
Rsph3bQ9DA80 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rsph3bQ9DA80 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rsph3bQ9DA80 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rsph3bQ9DA80 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.76■□□□□ 0.75
Rsph3bQ9DA80 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rsph3bQ9DA80 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rsph3bQ9DA80 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rsph3bQ9DA80 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.76■□□□□ 0.75
Rsph3bQ9DA80 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rsph3bQ9DA80 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rsph3bQ9DA80 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rsph3bQ9DA80 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Rsph3bQ9DA80 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rsph3bQ9DA80 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rsph3bQ9DA80 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rsph3bQ9DA80 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rsph3bQ9DA80 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rsph3bQ9DA80 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.75■□□□□ 0.75
Rsph3bQ9DA80 Gm15375-201ENSMUST00000119510 849 ntBASIC19.75■□□□□ 0.75
Rsph3bQ9DA80 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.75■□□□□ 0.75
Rsph3bQ9DA80 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Rsph3bQ9DA80 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.75■□□□□ 0.75
Rsph3bQ9DA80 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rsph3bQ9DA80 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rsph3bQ9DA80 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rsph3bQ9DA80 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rsph3bQ9DA80 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rsph3bQ9DA80 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rsph3bQ9DA80 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Rsph3bQ9DA80 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rsph3bQ9DA80 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rsph3bQ9DA80 Gm37055-201ENSMUST00000191866 133 ntBASIC19.74■□□□□ 0.75
Rsph3bQ9DA80 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.74■□□□□ 0.75
Rsph3bQ9DA80 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Rsph3bQ9DA80 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rsph3bQ9DA80 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Rsph3bQ9DA80 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rsph3bQ9DA80 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.74■□□□□ 0.75
Rsph3bQ9DA80 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rsph3bQ9DA80 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rsph3bQ9DA80 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rsph3bQ9DA80 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rsph3bQ9DA80 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rsph3bQ9DA80 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rsph3bQ9DA80 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rsph3bQ9DA80 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.73■□□□□ 0.75
Rsph3bQ9DA80 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.73■□□□□ 0.75
Rsph3bQ9DA80 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rsph3bQ9DA80 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rsph3bQ9DA80 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rsph3bQ9DA80 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rsph3bQ9DA80 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Rsph3bQ9DA80 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.73■□□□□ 0.75
Rsph3bQ9DA80 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rsph3bQ9DA80 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rsph3bQ9DA80 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rsph3bQ9DA80 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rsph3bQ9DA80 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rsph3bQ9DA80 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rsph3bQ9DA80 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rsph3bQ9DA80 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Rsph3bQ9DA80 Gm43183-201ENSMUST00000200632 547 ntBASIC19.72■□□□□ 0.75
Rsph3bQ9DA80 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Rsph3bQ9DA80 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rsph3bQ9DA80 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rsph3bQ9DA80 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rsph3bQ9DA80 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rsph3bQ9DA80 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Rsph3bQ9DA80 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rsph3bQ9DA80 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rsph3bQ9DA80 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rsph3bQ9DA80 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Rsph3bQ9DA80 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
Rsph3bQ9DA80 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.71■□□□□ 0.75
Rsph3bQ9DA80 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
Rsph3bQ9DA80 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Rsph3bQ9DA80 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Rsph3bQ9DA80 Gm42545-201ENSMUST00000202755 922 ntBASIC19.71■□□□□ 0.75
Rsph3bQ9DA80 Gm18025-201ENSMUST00000221733 862 ntBASIC19.71■□□□□ 0.75
Rsph3bQ9DA80 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Rsph3bQ9DA80 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rsph3bQ9DA80 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rsph3bQ9DA80 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rsph3bQ9DA80 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rsph3bQ9DA80 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rsph3bQ9DA80 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rsph3bQ9DA80 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms