Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC15.02■□□□□ -0
Trim63Q38HM4 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim63Q38HM4 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim63Q38HM4 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Trim63Q38HM4 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim63Q38HM4 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim63Q38HM4 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trim63Q38HM4 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim63Q38HM4 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trim63Q38HM4 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim63Q38HM4 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim63Q38HM4 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim63Q38HM4 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim63Q38HM4 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trim63Q38HM4 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trim63Q38HM4 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim63Q38HM4 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim63Q38HM4 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim63Q38HM4 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim63Q38HM4 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim63Q38HM4 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim63Q38HM4 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim63Q38HM4 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim63Q38HM4 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trim63Q38HM4 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim63Q38HM4 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim63Q38HM4 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim63Q38HM4 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim63Q38HM4 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim63Q38HM4 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim63Q38HM4 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC15□□□□□ -0.01
Trim63Q38HM4 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim63Q38HM4 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim63Q38HM4 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim63Q38HM4 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trim63Q38HM4 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim63Q38HM4 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC15□□□□□ -0.01
Trim63Q38HM4 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15□□□□□ -0.01
Trim63Q38HM4 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim63Q38HM4 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim63Q38HM4 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim63Q38HM4 Gm43213-201ENSMUST00000151866 1790 ntBASIC15□□□□□ -0.01
Trim63Q38HM4 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trim63Q38HM4 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15□□□□□ -0.01
Trim63Q38HM4 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim63Q38HM4 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim63Q38HM4 Gm43338-201ENSMUST00000198617 2223 ntBASIC15□□□□□ -0.01
Trim63Q38HM4 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim63Q38HM4 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim63Q38HM4 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trim63Q38HM4 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.99□□□□□ -0.01
Trim63Q38HM4 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim63Q38HM4 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trim63Q38HM4 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trim63Q38HM4 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim63Q38HM4 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim63Q38HM4 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim63Q38HM4 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim63Q38HM4 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim63Q38HM4 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trim63Q38HM4 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim63Q38HM4 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim63Q38HM4 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim63Q38HM4 Gm6821-201ENSMUST00000107540 542 ntBASIC14.99□□□□□ -0.01
Trim63Q38HM4 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC14.99□□□□□ -0.01
Trim63Q38HM4 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC14.99□□□□□ -0.01
Trim63Q38HM4 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim63Q38HM4 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim63Q38HM4 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim63Q38HM4 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim63Q38HM4 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trim63Q38HM4 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim63Q38HM4 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trim63Q38HM4 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim63Q38HM4 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim63Q38HM4 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim63Q38HM4 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim63Q38HM4 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Trim63Q38HM4 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim63Q38HM4 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim63Q38HM4 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim63Q38HM4 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim63Q38HM4 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim63Q38HM4 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trim63Q38HM4 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim63Q38HM4 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Trim63Q38HM4 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim63Q38HM4 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC14.98□□□□□ -0.01
Trim63Q38HM4 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC14.98□□□□□ -0.01
Trim63Q38HM4 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC14.98□□□□□ -0.01
Trim63Q38HM4 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim63Q38HM4 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim63Q38HM4 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim63Q38HM4 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim63Q38HM4 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim63Q38HM4 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.97□□□□□ -0.01
Trim63Q38HM4 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim63Q38HM4 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim63Q38HM4 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC14.97□□□□□ -0.01
Trim63Q38HM4 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms