Protein–RNA interactions for Protein: A0A075B642

Trav10, T cell receptor alpha variable 10 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10A0A075B642 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav10A0A075B642 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.05■□□□□ 0.16
Trav10A0A075B642 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav10A0A075B642 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav10A0A075B642 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Trav10A0A075B642 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav10A0A075B642 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.04■□□□□ 0.16
Trav10A0A075B642 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trav10A0A075B642 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav10A0A075B642 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav10A0A075B642 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Trav10A0A075B642 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav10A0A075B642 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav10A0A075B642 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav10A0A075B642 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav10A0A075B642 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.04■□□□□ 0.16
Trav10A0A075B642 Mir5133-201ENSMUST00000174955 77 ntBASIC16.04■□□□□ 0.16
Trav10A0A075B642 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav10A0A075B642 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.04■□□□□ 0.16
Trav10A0A075B642 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.04■□□□□ 0.16
Trav10A0A075B642 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav10A0A075B642 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.04■□□□□ 0.16
Trav10A0A075B642 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.04■□□□□ 0.16
Trav10A0A075B642 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav10A0A075B642 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav10A0A075B642 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav10A0A075B642 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav10A0A075B642 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Trav10A0A075B642 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav10A0A075B642 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav10A0A075B642 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav10A0A075B642 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Trav10A0A075B642 Gm22325-201ENSMUST00000158904 308 ntBASIC16.03■□□□□ 0.16
Trav10A0A075B642 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Trav10A0A075B642 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav10A0A075B642 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav10A0A075B642 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav10A0A075B642 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav10A0A075B642 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav10A0A075B642 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav10A0A075B642 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav10A0A075B642 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav10A0A075B642 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav10A0A075B642 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav10A0A075B642 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav10A0A075B642 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav10A0A075B642 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Trav10A0A075B642 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav10A0A075B642 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav10A0A075B642 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav10A0A075B642 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trav10A0A075B642 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav10A0A075B642 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav10A0A075B642 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav10A0A075B642 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trav10A0A075B642 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav10A0A075B642 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Trav10A0A075B642 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav10A0A075B642 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trav10A0A075B642 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trav10A0A075B642 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav10A0A075B642 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.01■□□□□ 0.15
Trav10A0A075B642 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.01■□□□□ 0.15
Trav10A0A075B642 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav10A0A075B642 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav10A0A075B642 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav10A0A075B642 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav10A0A075B642 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Trav10A0A075B642 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Trav10A0A075B642 Gm13148-201ENSMUST00000118892 745 ntBASIC16.01■□□□□ 0.15
Trav10A0A075B642 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.01■□□□□ 0.15
Trav10A0A075B642 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav10A0A075B642 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav10A0A075B642 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav10A0A075B642 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav10A0A075B642 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Trav10A0A075B642 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Trav10A0A075B642 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav10A0A075B642 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16■□□□□ 0.15
Trav10A0A075B642 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Trav10A0A075B642 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav10A0A075B642 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav10A0A075B642 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav10A0A075B642 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav10A0A075B642 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Trav10A0A075B642 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16■□□□□ 0.15
Trav10A0A075B642 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav10A0A075B642 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16■□□□□ 0.15
Trav10A0A075B642 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16■□□□□ 0.15
Trav10A0A075B642 Slc35b2-207ENSMUST00000226086 850 ntBASIC16■□□□□ 0.15
Trav10A0A075B642 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav10A0A075B642 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16■□□□□ 0.15
Trav10A0A075B642 Gm42939-201ENSMUST00000197514 2205 ntBASIC16■□□□□ 0.15
Trav10A0A075B642 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16■□□□□ 0.15
Trav10A0A075B642 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav10A0A075B642 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
Trav10A0A075B642 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav10A0A075B642 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav10A0A075B642 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav10A0A075B642 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms