Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SynbQ8BI41 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SynbQ8BI41 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SynbQ8BI41 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SynbQ8BI41 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SynbQ8BI41 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.24■□□□□ 0.35
SynbQ8BI41 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SynbQ8BI41 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SynbQ8BI41 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SynbQ8BI41 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SynbQ8BI41 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SynbQ8BI41 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SynbQ8BI41 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SynbQ8BI41 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SynbQ8BI41 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SynbQ8BI41 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SynbQ8BI41 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SynbQ8BI41 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SynbQ8BI41 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SynbQ8BI41 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
SynbQ8BI41 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SynbQ8BI41 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SynbQ8BI41 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SynbQ8BI41 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.23■□□□□ 0.35
SynbQ8BI41 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SynbQ8BI41 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.23■□□□□ 0.35
SynbQ8BI41 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SynbQ8BI41 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SynbQ8BI41 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SynbQ8BI41 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.23■□□□□ 0.35
SynbQ8BI41 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SynbQ8BI41 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SynbQ8BI41 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SynbQ8BI41 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SynbQ8BI41 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SynbQ8BI41 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SynbQ8BI41 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.22■□□□□ 0.35
SynbQ8BI41 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SynbQ8BI41 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SynbQ8BI41 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SynbQ8BI41 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SynbQ8BI41 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.22■□□□□ 0.35
SynbQ8BI41 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.22■□□□□ 0.35
SynbQ8BI41 Gm715-201ENSMUST00000117865 831 ntBASIC17.22■□□□□ 0.35
SynbQ8BI41 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SynbQ8BI41 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.22■□□□□ 0.35
SynbQ8BI41 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SynbQ8BI41 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.22■□□□□ 0.35
SynbQ8BI41 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SynbQ8BI41 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SynbQ8BI41 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.22■□□□□ 0.35
SynbQ8BI41 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SynbQ8BI41 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SynbQ8BI41 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SynbQ8BI41 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SynbQ8BI41 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SynbQ8BI41 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SynbQ8BI41 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SynbQ8BI41 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SynbQ8BI41 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SynbQ8BI41 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
SynbQ8BI41 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SynbQ8BI41 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SynbQ8BI41 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.21■□□□□ 0.35
SynbQ8BI41 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SynbQ8BI41 Gm11249-201ENSMUST00000117071 859 ntBASIC17.21■□□□□ 0.35
SynbQ8BI41 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SynbQ8BI41 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.21■□□□□ 0.35
SynbQ8BI41 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SynbQ8BI41 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
SynbQ8BI41 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SynbQ8BI41 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SynbQ8BI41 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SynbQ8BI41 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SynbQ8BI41 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SynbQ8BI41 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SynbQ8BI41 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SynbQ8BI41 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SynbQ8BI41 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.2■□□□□ 0.34
SynbQ8BI41 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SynbQ8BI41 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SynbQ8BI41 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.2■□□□□ 0.34
SynbQ8BI41 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SynbQ8BI41 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SynbQ8BI41 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SynbQ8BI41 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SynbQ8BI41 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SynbQ8BI41 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SynbQ8BI41 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SynbQ8BI41 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SynbQ8BI41 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.19■□□□□ 0.34
SynbQ8BI41 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.19■□□□□ 0.34
SynbQ8BI41 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SynbQ8BI41 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
SynbQ8BI41 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.19■□□□□ 0.34
SynbQ8BI41 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SynbQ8BI41 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SynbQ8BI41 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SynbQ8BI41 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SynbQ8BI41 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms