Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tnfrsf1aP25118 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Tnfrsf1aP25118 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Tnfrsf1aP25118 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Tnfrsf1aP25118 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tnfrsf1aP25118 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Tnfrsf1aP25118 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tnfrsf1aP25118 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tnfrsf1aP25118 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Tnfrsf1aP25118 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.02
Tnfrsf1aP25118 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf1aP25118 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf1aP25118 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf1aP25118 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf1aP25118 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf1aP25118 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Tnfrsf1aP25118 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC15.2■□□□□ 0.02
Tnfrsf1aP25118 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.2■□□□□ 0.02
Tnfrsf1aP25118 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC15.2■□□□□ 0.02
Tnfrsf1aP25118 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf1aP25118 AC160393.1-201ENSMUST00000218378 1279 ntBASIC15.2■□□□□ 0.02
Tnfrsf1aP25118 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf1aP25118 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.2■□□□□ 0.02
Tnfrsf1aP25118 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf1aP25118 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf1aP25118 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf1aP25118 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Tnfrsf1aP25118 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf1aP25118 AC123834.2-201ENSMUST00000224038 2340 ntBASIC15.2■□□□□ 0.02
Tnfrsf1aP25118 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf1aP25118 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf1aP25118 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf1aP25118 Gm9194-201ENSMUST00000220749 1447 ntBASIC15.19■□□□□ 0.02
Tnfrsf1aP25118 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf1aP25118 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf1aP25118 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC15.19■□□□□ 0.02
Tnfrsf1aP25118 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf1aP25118 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Tnfrsf1aP25118 Gm8495-201ENSMUST00000188740 694 ntBASIC15.19■□□□□ 0.02
Tnfrsf1aP25118 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC15.19■□□□□ 0.02
Tnfrsf1aP25118 Gm18671-201ENSMUST00000214826 683 ntBASIC15.19■□□□□ 0.02
Tnfrsf1aP25118 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf1aP25118 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf1aP25118 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf1aP25118 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf1aP25118 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Tnfrsf1aP25118 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf1aP25118 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf1aP25118 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf1aP25118 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Tnfrsf1aP25118 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf1aP25118 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf1aP25118 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf1aP25118 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf1aP25118 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf1aP25118 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf1aP25118 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf1aP25118 Gm18284-201ENSMUST00000172604 624 ntBASIC15.18■□□□□ 0.02
Tnfrsf1aP25118 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC15.18■□□□□ 0.02
Tnfrsf1aP25118 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf1aP25118 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf1aP25118 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Tnfrsf1aP25118 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf1aP25118 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Tnfrsf1aP25118 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC15.17■□□□□ 0.02
Tnfrsf1aP25118 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.17■□□□□ 0.02
Tnfrsf1aP25118 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf1aP25118 Gm5953-201ENSMUST00000220644 2616 ntBASIC15.17■□□□□ 0.02
Tnfrsf1aP25118 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf1aP25118 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf1aP25118 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf1aP25118 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf1aP25118 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
Tnfrsf1aP25118 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf1aP25118 Gm37805-201ENSMUST00000192612 1094 ntBASIC15.17■□□□□ 0.02
Tnfrsf1aP25118 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC15.17■□□□□ 0.02
Tnfrsf1aP25118 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf1aP25118 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf1aP25118 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tnfrsf1aP25118 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tnfrsf1aP25118 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tnfrsf1aP25118 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Tnfrsf1aP25118 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tnfrsf1aP25118 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tnfrsf1aP25118 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC15.16■□□□□ 0.02
Tnfrsf1aP25118 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tnfrsf1aP25118 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tnfrsf1aP25118 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Tnfrsf1aP25118 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC15.16■□□□□ 0.02
Tnfrsf1aP25118 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Tnfrsf1aP25118 Grk6-206ENSMUST00000224995 2971 ntBASIC15.16■□□□□ 0.02
Tnfrsf1aP25118 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tnfrsf1aP25118 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tnfrsf1aP25118 Gm8309-201ENSMUST00000206627 1448 ntBASIC15.16■□□□□ 0.02
Tnfrsf1aP25118 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tnfrsf1aP25118 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tnfrsf1aP25118 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tnfrsf1aP25118 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tnfrsf1aP25118 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tnfrsf1aP25118 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms