Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
H2afb1S4R1E0 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.5■□□□□ 0.23
H2afb1S4R1E0 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
H2afb1S4R1E0 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
H2afb1S4R1E0 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
H2afb1S4R1E0 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
H2afb1S4R1E0 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
H2afb1S4R1E0 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
H2afb1S4R1E0 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
H2afb1S4R1E0 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.49■□□□□ 0.23
H2afb1S4R1E0 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.49■□□□□ 0.23
H2afb1S4R1E0 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
H2afb1S4R1E0 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
H2afb1S4R1E0 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
H2afb1S4R1E0 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
H2afb1S4R1E0 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
H2afb1S4R1E0 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
H2afb1S4R1E0 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
H2afb1S4R1E0 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2afb1S4R1E0 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2afb1S4R1E0 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
H2afb1S4R1E0 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2afb1S4R1E0 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
H2afb1S4R1E0 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2afb1S4R1E0 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
H2afb1S4R1E0 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2afb1S4R1E0 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2afb1S4R1E0 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2afb1S4R1E0 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2afb1S4R1E0 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2afb1S4R1E0 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
H2afb1S4R1E0 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.47■□□□□ 0.23
H2afb1S4R1E0 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
H2afb1S4R1E0 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC16.47■□□□□ 0.23
H2afb1S4R1E0 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.47■□□□□ 0.23
H2afb1S4R1E0 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
H2afb1S4R1E0 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
H2afb1S4R1E0 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
H2afb1S4R1E0 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
H2afb1S4R1E0 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
H2afb1S4R1E0 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
H2afb1S4R1E0 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
H2afb1S4R1E0 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
H2afb1S4R1E0 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
H2afb1S4R1E0 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
H2afb1S4R1E0 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
H2afb1S4R1E0 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
H2afb1S4R1E0 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
H2afb1S4R1E0 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
H2afb1S4R1E0 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
H2afb1S4R1E0 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
H2afb1S4R1E0 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
H2afb1S4R1E0 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
H2afb1S4R1E0 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
H2afb1S4R1E0 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
H2afb1S4R1E0 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
H2afb1S4R1E0 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
H2afb1S4R1E0 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.46■□□□□ 0.23
H2afb1S4R1E0 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
H2afb1S4R1E0 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.46■□□□□ 0.23
H2afb1S4R1E0 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
H2afb1S4R1E0 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
H2afb1S4R1E0 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
H2afb1S4R1E0 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
H2afb1S4R1E0 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
H2afb1S4R1E0 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
H2afb1S4R1E0 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
H2afb1S4R1E0 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
H2afb1S4R1E0 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
H2afb1S4R1E0 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.45■□□□□ 0.22
H2afb1S4R1E0 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2afb1S4R1E0 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.45■□□□□ 0.22
H2afb1S4R1E0 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
H2afb1S4R1E0 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
H2afb1S4R1E0 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2afb1S4R1E0 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.45■□□□□ 0.22
H2afb1S4R1E0 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2afb1S4R1E0 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2afb1S4R1E0 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.45■□□□□ 0.22
H2afb1S4R1E0 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.45■□□□□ 0.22
H2afb1S4R1E0 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2afb1S4R1E0 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.45■□□□□ 0.22
H2afb1S4R1E0 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.45■□□□□ 0.22
H2afb1S4R1E0 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
H2afb1S4R1E0 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
H2afb1S4R1E0 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
H2afb1S4R1E0 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.45■□□□□ 0.22
H2afb1S4R1E0 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2afb1S4R1E0 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
H2afb1S4R1E0 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
H2afb1S4R1E0 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
H2afb1S4R1E0 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
H2afb1S4R1E0 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
H2afb1S4R1E0 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC16.44■□□□□ 0.22
H2afb1S4R1E0 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC16.44■□□□□ 0.22
H2afb1S4R1E0 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
H2afb1S4R1E0 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
H2afb1S4R1E0 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
H2afb1S4R1E0 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
H2afb1S4R1E0 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms