Protein–RNA interactions for Protein: Q9R013

Ctsf, Cathepsin F, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtsfQ9R013 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
CtsfQ9R013 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CtsfQ9R013 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CtsfQ9R013 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.73■□□□□ 0.75
CtsfQ9R013 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CtsfQ9R013 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CtsfQ9R013 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.73■□□□□ 0.75
CtsfQ9R013 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CtsfQ9R013 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CtsfQ9R013 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CtsfQ9R013 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CtsfQ9R013 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CtsfQ9R013 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CtsfQ9R013 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CtsfQ9R013 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CtsfQ9R013 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CtsfQ9R013 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CtsfQ9R013 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CtsfQ9R013 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CtsfQ9R013 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.72■□□□□ 0.75
CtsfQ9R013 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CtsfQ9R013 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CtsfQ9R013 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CtsfQ9R013 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CtsfQ9R013 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CtsfQ9R013 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CtsfQ9R013 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CtsfQ9R013 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CtsfQ9R013 Mir1199-201ENSMUST00000117015 119 ntBASIC19.71■□□□□ 0.75
CtsfQ9R013 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CtsfQ9R013 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CtsfQ9R013 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.71■□□□□ 0.75
CtsfQ9R013 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.71■□□□□ 0.75
CtsfQ9R013 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.71■□□□□ 0.75
CtsfQ9R013 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CtsfQ9R013 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CtsfQ9R013 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.71■□□□□ 0.75
CtsfQ9R013 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CtsfQ9R013 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CtsfQ9R013 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CtsfQ9R013 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CtsfQ9R013 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CtsfQ9R013 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CtsfQ9R013 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CtsfQ9R013 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CtsfQ9R013 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.7■□□□□ 0.74
CtsfQ9R013 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.7■□□□□ 0.74
CtsfQ9R013 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.7■□□□□ 0.74
CtsfQ9R013 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CtsfQ9R013 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CtsfQ9R013 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CtsfQ9R013 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CtsfQ9R013 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CtsfQ9R013 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CtsfQ9R013 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CtsfQ9R013 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CtsfQ9R013 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CtsfQ9R013 Flg-201ENSMUST00000050758 1488 ntBASIC19.69■□□□□ 0.74
CtsfQ9R013 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CtsfQ9R013 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CtsfQ9R013 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CtsfQ9R013 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.69■□□□□ 0.74
CtsfQ9R013 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CtsfQ9R013 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CtsfQ9R013 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CtsfQ9R013 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CtsfQ9R013 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.68■□□□□ 0.74
CtsfQ9R013 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.68■□□□□ 0.74
CtsfQ9R013 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.68■□□□□ 0.74
CtsfQ9R013 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
CtsfQ9R013 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.68■□□□□ 0.74
CtsfQ9R013 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CtsfQ9R013 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CtsfQ9R013 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CtsfQ9R013 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CtsfQ9R013 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CtsfQ9R013 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CtsfQ9R013 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CtsfQ9R013 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CtsfQ9R013 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CtsfQ9R013 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CtsfQ9R013 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CtsfQ9R013 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CtsfQ9R013 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CtsfQ9R013 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CtsfQ9R013 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CtsfQ9R013 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CtsfQ9R013 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.67■□□□□ 0.74
CtsfQ9R013 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CtsfQ9R013 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
CtsfQ9R013 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CtsfQ9R013 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.66■□□□□ 0.74
CtsfQ9R013 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CtsfQ9R013 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CtsfQ9R013 Gm11927-201ENSMUST00000118472 759 ntBASIC19.66■□□□□ 0.74
CtsfQ9R013 Gm37055-201ENSMUST00000191866 133 ntBASIC19.66■□□□□ 0.74
CtsfQ9R013 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.66■□□□□ 0.74
CtsfQ9R013 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CtsfQ9R013 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CtsfQ9R013 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 622 ms