Protein–RNA interactions for Protein: Q9CQE0

Rnf138, E3 ubiquitin-protein ligase RNF138, mousemouse

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf138Q9CQE0 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf138Q9CQE0 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
Rnf138Q9CQE0 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rnf138Q9CQE0 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Rnf138Q9CQE0 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf138Q9CQE0 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf138Q9CQE0 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf138Q9CQE0 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.05■□□□□ 0.32
Rnf138Q9CQE0 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Rnf138Q9CQE0 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf138Q9CQE0 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Rnf138Q9CQE0 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf138Q9CQE0 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf138Q9CQE0 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf138Q9CQE0 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Rnf138Q9CQE0 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf138Q9CQE0 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf138Q9CQE0 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf138Q9CQE0 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rnf138Q9CQE0 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf138Q9CQE0 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Rnf138Q9CQE0 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf138Q9CQE0 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.04■□□□□ 0.32
Rnf138Q9CQE0 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf138Q9CQE0 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf138Q9CQE0 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.04■□□□□ 0.32
Rnf138Q9CQE0 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf138Q9CQE0 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf138Q9CQE0 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Rnf138Q9CQE0 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf138Q9CQE0 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Rnf138Q9CQE0 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.04■□□□□ 0.32
Rnf138Q9CQE0 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf138Q9CQE0 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Rnf138Q9CQE0 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf138Q9CQE0 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf138Q9CQE0 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf138Q9CQE0 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf138Q9CQE0 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf138Q9CQE0 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf138Q9CQE0 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf138Q9CQE0 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf138Q9CQE0 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Rnf138Q9CQE0 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf138Q9CQE0 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf138Q9CQE0 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.03■□□□□ 0.32
Rnf138Q9CQE0 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf138Q9CQE0 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf138Q9CQE0 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf138Q9CQE0 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf138Q9CQE0 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf138Q9CQE0 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.02■□□□□ 0.32
Rnf138Q9CQE0 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf138Q9CQE0 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf138Q9CQE0 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf138Q9CQE0 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf138Q9CQE0 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Rnf138Q9CQE0 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf138Q9CQE0 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf138Q9CQE0 Gm11643-201ENSMUST00000119578 864 ntBASIC17.02■□□□□ 0.32
Rnf138Q9CQE0 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.02■□□□□ 0.32
Rnf138Q9CQE0 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.02■□□□□ 0.32
Rnf138Q9CQE0 Mir5122-201ENSMUST00000175004 89 ntBASIC17.02■□□□□ 0.32
Rnf138Q9CQE0 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf138Q9CQE0 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.02■□□□□ 0.32
Rnf138Q9CQE0 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.02■□□□□ 0.32
Rnf138Q9CQE0 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.02■□□□□ 0.32
Rnf138Q9CQE0 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf138Q9CQE0 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rnf138Q9CQE0 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
Rnf138Q9CQE0 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rnf138Q9CQE0 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rnf138Q9CQE0 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf138Q9CQE0 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Rnf138Q9CQE0 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf138Q9CQE0 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.01■□□□□ 0.31
Rnf138Q9CQE0 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf138Q9CQE0 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf138Q9CQE0 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.01■□□□□ 0.31
Rnf138Q9CQE0 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.01■□□□□ 0.31
Rnf138Q9CQE0 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
Rnf138Q9CQE0 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.01■□□□□ 0.31
Rnf138Q9CQE0 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.01■□□□□ 0.31
Rnf138Q9CQE0 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf138Q9CQE0 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf138Q9CQE0 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf138Q9CQE0 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Rnf138Q9CQE0 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf138Q9CQE0 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17■□□□□ 0.31
Rnf138Q9CQE0 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17■□□□□ 0.31
Rnf138Q9CQE0 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rnf138Q9CQE0 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rnf138Q9CQE0 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17■□□□□ 0.31
Rnf138Q9CQE0 AL672049.1-201ENSMUST00000197943 91 ntBASIC17■□□□□ 0.31
Rnf138Q9CQE0 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17■□□□□ 0.31
Rnf138Q9CQE0 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17■□□□□ 0.31
Rnf138Q9CQE0 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17■□□□□ 0.31
Rnf138Q9CQE0 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17■□□□□ 0.31
Rnf138Q9CQE0 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Rnf138Q9CQE0 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms