Protein–RNA interactions for Protein: Q8CDN1

Uncharacterized protein C3orf20 homolog, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8CDN1 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Q8CDN1 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Q8CDN1 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Q8CDN1 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Q8CDN1 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.75■□□□□ 0.59
Q8CDN1 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Q8CDN1 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Q8CDN1 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Q8CDN1 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Q8CDN1 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Q8CDN1 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Q8CDN1 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.75■□□□□ 0.59
Q8CDN1 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Q8CDN1 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Q8CDN1 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Q8CDN1 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Q8CDN1 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Q8CDN1 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Q8CDN1 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Q8CDN1 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Q8CDN1 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.75■□□□□ 0.59
Q8CDN1 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Q8CDN1 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Q8CDN1 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Q8CDN1 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Q8CDN1 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Q8CDN1 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Q8CDN1 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Q8CDN1 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Q8CDN1 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Q8CDN1 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Q8CDN1 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Q8CDN1 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.74■□□□□ 0.59
Q8CDN1 Gm6576-201ENSMUST00000169678 883 ntBASIC18.74■□□□□ 0.59
Q8CDN1 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.74■□□□□ 0.59
Q8CDN1 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Q8CDN1 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Q8CDN1 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.74■□□□□ 0.59
Q8CDN1 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Q8CDN1 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Q8CDN1 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Q8CDN1 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Q8CDN1 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Q8CDN1 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.73■□□□□ 0.59
Q8CDN1 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.73■□□□□ 0.59
Q8CDN1 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Q8CDN1 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Q8CDN1 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Q8CDN1 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Q8CDN1 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Q8CDN1 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Q8CDN1 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Q8CDN1 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Q8CDN1 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Q8CDN1 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Q8CDN1 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
Q8CDN1 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.72■□□□□ 0.59
Q8CDN1 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Q8CDN1 Golph3-205ENSMUST00000228671 2842 ntBASIC18.72■□□□□ 0.59
Q8CDN1 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Q8CDN1 Gm715-201ENSMUST00000117865 831 ntBASIC18.72■□□□□ 0.59
Q8CDN1 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.72■□□□□ 0.59
Q8CDN1 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.72■□□□□ 0.59
Q8CDN1 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.72■□□□□ 0.59
Q8CDN1 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Q8CDN1 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Q8CDN1 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Q8CDN1 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.72■□□□□ 0.59
Q8CDN1 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Q8CDN1 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Q8CDN1 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.71■□□□□ 0.59
Q8CDN1 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Q8CDN1 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Q8CDN1 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Q8CDN1 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Q8CDN1 Mir1199-201ENSMUST00000117015 119 ntBASIC18.71■□□□□ 0.59
Q8CDN1 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.71■□□□□ 0.59
Q8CDN1 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.71■□□□□ 0.59
Q8CDN1 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Q8CDN1 Gm10138-203ENSMUST00000206952 366 ntBASIC18.71■□□□□ 0.59
Q8CDN1 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Q8CDN1 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Q8CDN1 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Q8CDN1 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.71■□□□□ 0.59
Q8CDN1 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Q8CDN1 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Q8CDN1 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.71■□□□□ 0.58
Q8CDN1 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Q8CDN1 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Q8CDN1 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Q8CDN1 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.7■□□□□ 0.58
Q8CDN1 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.7■□□□□ 0.58
Q8CDN1 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Q8CDN1 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Q8CDN1 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Q8CDN1 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Q8CDN1 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Q8CDN1 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Q8CDN1 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Q8CDN1 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms