Protein–RNA interactions for Protein: Q3UHX8

Nkx6-3, Homeobox protein Nkx-6.3, mousemouse

Predictions only

Length 262 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-3Q3UHX8 Gm13158-201ENSMUST00000122007 736 ntBASIC17.2■□□□□ 0.34
Nkx6-3Q3UHX8 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.2■□□□□ 0.34
Nkx6-3Q3UHX8 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx6-3Q3UHX8 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Nkx6-3Q3UHX8 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx6-3Q3UHX8 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.2■□□□□ 0.34
Nkx6-3Q3UHX8 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx6-3Q3UHX8 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.19■□□□□ 0.34
Nkx6-3Q3UHX8 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx6-3Q3UHX8 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx6-3Q3UHX8 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Nkx6-3Q3UHX8 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx6-3Q3UHX8 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx6-3Q3UHX8 Gm18666-201ENSMUST00000190039 958 ntBASIC17.19■□□□□ 0.34
Nkx6-3Q3UHX8 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx6-3Q3UHX8 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx6-3Q3UHX8 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx6-3Q3UHX8 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Nkx6-3Q3UHX8 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx6-3Q3UHX8 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx6-3Q3UHX8 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx6-3Q3UHX8 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx6-3Q3UHX8 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.18■□□□□ 0.34
Nkx6-3Q3UHX8 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx6-3Q3UHX8 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx6-3Q3UHX8 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.18■□□□□ 0.34
Nkx6-3Q3UHX8 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx6-3Q3UHX8 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx6-3Q3UHX8 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx6-3Q3UHX8 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx6-3Q3UHX8 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx6-3Q3UHX8 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.18■□□□□ 0.34
Nkx6-3Q3UHX8 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx6-3Q3UHX8 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx6-3Q3UHX8 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx6-3Q3UHX8 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx6-3Q3UHX8 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx6-3Q3UHX8 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx6-3Q3UHX8 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx6-3Q3UHX8 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx6-3Q3UHX8 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx6-3Q3UHX8 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx6-3Q3UHX8 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx6-3Q3UHX8 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx6-3Q3UHX8 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.17■□□□□ 0.34
Nkx6-3Q3UHX8 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx6-3Q3UHX8 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Nkx6-3Q3UHX8 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx6-3Q3UHX8 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx6-3Q3UHX8 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.17■□□□□ 0.34
Nkx6-3Q3UHX8 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx6-3Q3UHX8 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Nkx6-3Q3UHX8 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx6-3Q3UHX8 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx6-3Q3UHX8 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx6-3Q3UHX8 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.16■□□□□ 0.34
Nkx6-3Q3UHX8 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.16■□□□□ 0.34
Nkx6-3Q3UHX8 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx6-3Q3UHX8 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.16■□□□□ 0.34
Nkx6-3Q3UHX8 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.16■□□□□ 0.34
Nkx6-3Q3UHX8 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx6-3Q3UHX8 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx6-3Q3UHX8 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Nkx6-3Q3UHX8 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx6-3Q3UHX8 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx6-3Q3UHX8 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx6-3Q3UHX8 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Nkx6-3Q3UHX8 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx6-3Q3UHX8 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Nkx6-3Q3UHX8 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx6-3Q3UHX8 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx6-3Q3UHX8 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx6-3Q3UHX8 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Nkx6-3Q3UHX8 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.15■□□□□ 0.34
Nkx6-3Q3UHX8 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx6-3Q3UHX8 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.15■□□□□ 0.34
Nkx6-3Q3UHX8 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx6-3Q3UHX8 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx6-3Q3UHX8 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx6-3Q3UHX8 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx6-3Q3UHX8 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx6-3Q3UHX8 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx6-3Q3UHX8 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Nkx6-3Q3UHX8 Tgds-204ENSMUST00000228543 1594 ntBASIC17.15■□□□□ 0.34
Nkx6-3Q3UHX8 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx6-3Q3UHX8 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx6-3Q3UHX8 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx6-3Q3UHX8 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.14■□□□□ 0.33
Nkx6-3Q3UHX8 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.14■□□□□ 0.33
Nkx6-3Q3UHX8 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.14■□□□□ 0.33
Nkx6-3Q3UHX8 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx6-3Q3UHX8 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx6-3Q3UHX8 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.14■□□□□ 0.33
Nkx6-3Q3UHX8 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx6-3Q3UHX8 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx6-3Q3UHX8 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Nkx6-3Q3UHX8 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx6-3Q3UHX8 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Nkx6-3Q3UHX8 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx6-3Q3UHX8 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms