Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Brf2Q3UAW9 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Brf2Q3UAW9 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Brf2Q3UAW9 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Brf2Q3UAW9 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Brf2Q3UAW9 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Brf2Q3UAW9 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Brf2Q3UAW9 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Brf2Q3UAW9 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Brf2Q3UAW9 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Brf2Q3UAW9 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Brf2Q3UAW9 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.14■□□□□ 0.33
Brf2Q3UAW9 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Brf2Q3UAW9 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Brf2Q3UAW9 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Brf2Q3UAW9 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Brf2Q3UAW9 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Brf2Q3UAW9 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.14■□□□□ 0.33
Brf2Q3UAW9 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.14■□□□□ 0.33
Brf2Q3UAW9 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.14■□□□□ 0.33
Brf2Q3UAW9 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.14■□□□□ 0.33
Brf2Q3UAW9 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Brf2Q3UAW9 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Brf2Q3UAW9 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Brf2Q3UAW9 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Brf2Q3UAW9 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Brf2Q3UAW9 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Brf2Q3UAW9 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Brf2Q3UAW9 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Brf2Q3UAW9 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Brf2Q3UAW9 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Brf2Q3UAW9 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Brf2Q3UAW9 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Brf2Q3UAW9 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.13■□□□□ 0.33
Brf2Q3UAW9 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Brf2Q3UAW9 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.13■□□□□ 0.33
Brf2Q3UAW9 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.13■□□□□ 0.33
Brf2Q3UAW9 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Brf2Q3UAW9 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Brf2Q3UAW9 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Brf2Q3UAW9 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Brf2Q3UAW9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Brf2Q3UAW9 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Brf2Q3UAW9 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Brf2Q3UAW9 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.12■□□□□ 0.33
Brf2Q3UAW9 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Brf2Q3UAW9 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Brf2Q3UAW9 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Brf2Q3UAW9 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.12■□□□□ 0.33
Brf2Q3UAW9 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Brf2Q3UAW9 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Brf2Q3UAW9 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Brf2Q3UAW9 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Brf2Q3UAW9 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Brf2Q3UAW9 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Brf2Q3UAW9 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Brf2Q3UAW9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Brf2Q3UAW9 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Brf2Q3UAW9 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Brf2Q3UAW9 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Brf2Q3UAW9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Brf2Q3UAW9 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Brf2Q3UAW9 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Brf2Q3UAW9 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Brf2Q3UAW9 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Brf2Q3UAW9 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.11■□□□□ 0.33
Brf2Q3UAW9 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Brf2Q3UAW9 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Brf2Q3UAW9 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Brf2Q3UAW9 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Brf2Q3UAW9 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Brf2Q3UAW9 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.11■□□□□ 0.33
Brf2Q3UAW9 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Brf2Q3UAW9 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Brf2Q3UAW9 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Brf2Q3UAW9 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Brf2Q3UAW9 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Brf2Q3UAW9 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Brf2Q3UAW9 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Brf2Q3UAW9 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Brf2Q3UAW9 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Brf2Q3UAW9 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Brf2Q3UAW9 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.1■□□□□ 0.33
Brf2Q3UAW9 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Brf2Q3UAW9 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Brf2Q3UAW9 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Brf2Q3UAW9 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Brf2Q3UAW9 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Brf2Q3UAW9 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Brf2Q3UAW9 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.09■□□□□ 0.33
Brf2Q3UAW9 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.09■□□□□ 0.33
Brf2Q3UAW9 Gm42569-201ENSMUST00000200539 472 ntBASIC17.09■□□□□ 0.33
Brf2Q3UAW9 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Brf2Q3UAW9 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Brf2Q3UAW9 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Brf2Q3UAW9 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Brf2Q3UAW9 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.09■□□□□ 0.33
Brf2Q3UAW9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Brf2Q3UAW9 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Brf2Q3UAW9 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms