Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim63Q38HM4 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim63Q38HM4 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim63Q38HM4 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim63Q38HM4 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Trim63Q38HM4 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim63Q38HM4 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim63Q38HM4 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim63Q38HM4 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim63Q38HM4 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim63Q38HM4 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim63Q38HM4 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim63Q38HM4 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim63Q38HM4 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim63Q38HM4 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim63Q38HM4 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim63Q38HM4 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim63Q38HM4 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim63Q38HM4 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim63Q38HM4 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trim63Q38HM4 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.11■□□□□ 0.01
Trim63Q38HM4 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trim63Q38HM4 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim63Q38HM4 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Trim63Q38HM4 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim63Q38HM4 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim63Q38HM4 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim63Q38HM4 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim63Q38HM4 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.11■□□□□ 0.01
Trim63Q38HM4 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Trim63Q38HM4 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim63Q38HM4 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim63Q38HM4 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim63Q38HM4 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim63Q38HM4 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim63Q38HM4 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim63Q38HM4 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trim63Q38HM4 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim63Q38HM4 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim63Q38HM4 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim63Q38HM4 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim63Q38HM4 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim63Q38HM4 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim63Q38HM4 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim63Q38HM4 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim63Q38HM4 AC154454.1-201ENSMUST00000225253 216 ntBASIC15.1■□□□□ 0.01
Trim63Q38HM4 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim63Q38HM4 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim63Q38HM4 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim63Q38HM4 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim63Q38HM4 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim63Q38HM4 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim63Q38HM4 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim63Q38HM4 Gm38308-201ENSMUST00000194934 1809 ntBASIC15.1■□□□□ 0.01
Trim63Q38HM4 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim63Q38HM4 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim63Q38HM4 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trim63Q38HM4 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim63Q38HM4 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim63Q38HM4 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim63Q38HM4 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim63Q38HM4 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim63Q38HM4 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim63Q38HM4 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim63Q38HM4 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim63Q38HM4 Dancr-204ENSMUST00000132389 2347 ntBASIC15.09■□□□□ 0.01
Trim63Q38HM4 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim63Q38HM4 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim63Q38HM4 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim63Q38HM4 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim63Q38HM4 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim63Q38HM4 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim63Q38HM4 Gm45364-201ENSMUST00000210883 159 ntBASIC15.09■□□□□ 0.01
Trim63Q38HM4 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim63Q38HM4 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim63Q38HM4 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim63Q38HM4 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim63Q38HM4 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim63Q38HM4 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim63Q38HM4 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim63Q38HM4 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim63Q38HM4 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim63Q38HM4 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim63Q38HM4 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Trim63Q38HM4 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim63Q38HM4 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim63Q38HM4 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim63Q38HM4 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim63Q38HM4 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim63Q38HM4 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Trim63Q38HM4 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Trim63Q38HM4 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim63Q38HM4 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.08■□□□□ 0
Trim63Q38HM4 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim63Q38HM4 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC15.08■□□□□ 0
Trim63Q38HM4 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim63Q38HM4 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Trim63Q38HM4 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim63Q38HM4 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
Trim63Q38HM4 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms