Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf1aP25118 AC099934.2-201ENSMUST00000196389 70 ntBASIC15.26■□□□□ 0.03
Tnfrsf1aP25118 AC156953.1-201ENSMUST00000196953 70 ntBASIC15.26■□□□□ 0.03
Tnfrsf1aP25118 AC157822.2-201ENSMUST00000200291 70 ntBASIC15.26■□□□□ 0.03
Tnfrsf1aP25118 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC15.26■□□□□ 0.03
Tnfrsf1aP25118 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf1aP25118 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Tnfrsf1aP25118 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf1aP25118 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf1aP25118 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf1aP25118 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf1aP25118 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf1aP25118 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.26■□□□□ 0.03
Tnfrsf1aP25118 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf1aP25118 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf1aP25118 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf1aP25118 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tnfrsf1aP25118 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.25■□□□□ 0.03
Tnfrsf1aP25118 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf1aP25118 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf1aP25118 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf1aP25118 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf1aP25118 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf1aP25118 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf1aP25118 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf1aP25118 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tnfrsf1aP25118 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Tnfrsf1aP25118 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Tnfrsf1aP25118 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Tnfrsf1aP25118 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf1aP25118 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf1aP25118 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf1aP25118 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Tnfrsf1aP25118 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf1aP25118 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf1aP25118 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.24■□□□□ 0.03
Tnfrsf1aP25118 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf1aP25118 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf1aP25118 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf1aP25118 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf1aP25118 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf1aP25118 Gm13534-201ENSMUST00000121169 513 ntBASIC15.24■□□□□ 0.03
Tnfrsf1aP25118 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC15.24■□□□□ 0.03
Tnfrsf1aP25118 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf1aP25118 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf1aP25118 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.24■□□□□ 0.03
Tnfrsf1aP25118 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf1aP25118 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Tnfrsf1aP25118 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf1aP25118 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf1aP25118 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tnfrsf1aP25118 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.24■□□□□ 0.03
Tnfrsf1aP25118 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Tnfrsf1aP25118 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfrsf1aP25118 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfrsf1aP25118 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfrsf1aP25118 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfrsf1aP25118 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC15.23■□□□□ 0.03
Tnfrsf1aP25118 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfrsf1aP25118 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfrsf1aP25118 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfrsf1aP25118 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfrsf1aP25118 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfrsf1aP25118 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfrsf1aP25118 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tnfrsf1aP25118 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Tnfrsf1aP25118 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tnfrsf1aP25118 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tnfrsf1aP25118 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tnfrsf1aP25118 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tnfrsf1aP25118 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Tnfrsf1aP25118 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tnfrsf1aP25118 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tnfrsf1aP25118 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tnfrsf1aP25118 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Tnfrsf1aP25118 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tnfrsf1aP25118 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tnfrsf1aP25118 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.22■□□□□ 0.03
Tnfrsf1aP25118 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tnfrsf1aP25118 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Tnfrsf1aP25118 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tnfrsf1aP25118 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Tnfrsf1aP25118 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC15.22■□□□□ 0.03
Tnfrsf1aP25118 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tnfrsf1aP25118 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Tnfrsf1aP25118 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tnfrsf1aP25118 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tnfrsf1aP25118 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Tnfrsf1aP25118 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tnfrsf1aP25118 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tnfrsf1aP25118 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tnfrsf1aP25118 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Tnfrsf1aP25118 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Tnfrsf1aP25118 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tnfrsf1aP25118 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tnfrsf1aP25118 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tnfrsf1aP25118 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tnfrsf1aP25118 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tnfrsf1aP25118 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tnfrsf1aP25118 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms