Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BckdkO55028 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BckdkO55028 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BckdkO55028 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
BckdkO55028 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.85■□□□□ 0.29
BckdkO55028 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BckdkO55028 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.85■□□□□ 0.29
BckdkO55028 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
BckdkO55028 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
BckdkO55028 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
BckdkO55028 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BckdkO55028 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.85■□□□□ 0.29
BckdkO55028 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BckdkO55028 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BckdkO55028 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BckdkO55028 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BckdkO55028 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BckdkO55028 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
BckdkO55028 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
BckdkO55028 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
BckdkO55028 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
BckdkO55028 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
BckdkO55028 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
BckdkO55028 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BckdkO55028 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
BckdkO55028 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
BckdkO55028 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
BckdkO55028 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BckdkO55028 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BckdkO55028 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
BckdkO55028 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
BckdkO55028 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BckdkO55028 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
BckdkO55028 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BckdkO55028 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BckdkO55028 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BckdkO55028 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BckdkO55028 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BckdkO55028 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
BckdkO55028 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
BckdkO55028 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BckdkO55028 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.84■□□□□ 0.29
BckdkO55028 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
BckdkO55028 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
BckdkO55028 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.84■□□□□ 0.29
BckdkO55028 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
BckdkO55028 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
BckdkO55028 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
BckdkO55028 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
BckdkO55028 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
BckdkO55028 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
BckdkO55028 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
BckdkO55028 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.83■□□□□ 0.28
BckdkO55028 Gm20760-201ENSMUST00000179197 648 ntBASIC16.83■□□□□ 0.28
BckdkO55028 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.83■□□□□ 0.28
BckdkO55028 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.83■□□□□ 0.28
BckdkO55028 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.83■□□□□ 0.28
BckdkO55028 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BckdkO55028 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
BckdkO55028 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
BckdkO55028 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BckdkO55028 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BckdkO55028 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BckdkO55028 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
BckdkO55028 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BckdkO55028 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BckdkO55028 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BckdkO55028 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BckdkO55028 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.82■□□□□ 0.28
BckdkO55028 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
BckdkO55028 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
BckdkO55028 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
BckdkO55028 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BckdkO55028 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.82■□□□□ 0.28
BckdkO55028 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
BckdkO55028 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
BckdkO55028 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BckdkO55028 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
BckdkO55028 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
BckdkO55028 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BckdkO55028 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BckdkO55028 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BckdkO55028 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BckdkO55028 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BckdkO55028 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.81■□□□□ 0.28
BckdkO55028 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
BckdkO55028 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BckdkO55028 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
BckdkO55028 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.81■□□□□ 0.28
BckdkO55028 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BckdkO55028 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.81■□□□□ 0.28
BckdkO55028 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BckdkO55028 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.81■□□□□ 0.28
BckdkO55028 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
BckdkO55028 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
BckdkO55028 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BckdkO55028 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BckdkO55028 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BckdkO55028 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
BckdkO55028 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 95.3 ms