Protein–RNA interactions for Protein: Q8VE18

Smg8, Protein SMG8, mousemouse

Predictions only

Length 991 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg8Q8VE18 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smg8Q8VE18 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Smg8Q8VE18 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.5■□□□□ 0.71
Smg8Q8VE18 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Smg8Q8VE18 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smg8Q8VE18 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smg8Q8VE18 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smg8Q8VE18 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.49■□□□□ 0.71
Smg8Q8VE18 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smg8Q8VE18 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smg8Q8VE18 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smg8Q8VE18 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.49■□□□□ 0.71
Smg8Q8VE18 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smg8Q8VE18 Gm10138-203ENSMUST00000206952 366 ntBASIC19.49■□□□□ 0.71
Smg8Q8VE18 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smg8Q8VE18 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smg8Q8VE18 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Smg8Q8VE18 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smg8Q8VE18 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smg8Q8VE18 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Smg8Q8VE18 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smg8Q8VE18 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smg8Q8VE18 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smg8Q8VE18 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smg8Q8VE18 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smg8Q8VE18 Mir7071-201ENSMUST00000184847 69 ntBASIC19.48■□□□□ 0.71
Smg8Q8VE18 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Smg8Q8VE18 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Smg8Q8VE18 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smg8Q8VE18 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smg8Q8VE18 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smg8Q8VE18 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Smg8Q8VE18 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Smg8Q8VE18 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smg8Q8VE18 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smg8Q8VE18 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smg8Q8VE18 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smg8Q8VE18 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smg8Q8VE18 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smg8Q8VE18 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smg8Q8VE18 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smg8Q8VE18 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smg8Q8VE18 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smg8Q8VE18 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smg8Q8VE18 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
Smg8Q8VE18 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.47■□□□□ 0.71
Smg8Q8VE18 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smg8Q8VE18 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smg8Q8VE18 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.47■□□□□ 0.71
Smg8Q8VE18 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smg8Q8VE18 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smg8Q8VE18 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smg8Q8VE18 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Smg8Q8VE18 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smg8Q8VE18 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smg8Q8VE18 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Smg8Q8VE18 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.46■□□□□ 0.71
Smg8Q8VE18 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smg8Q8VE18 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Smg8Q8VE18 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Smg8Q8VE18 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Smg8Q8VE18 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.45■□□□□ 0.7
Smg8Q8VE18 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Smg8Q8VE18 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smg8Q8VE18 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Smg8Q8VE18 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.45■□□□□ 0.7
Smg8Q8VE18 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.45■□□□□ 0.7
Smg8Q8VE18 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.45■□□□□ 0.7
Smg8Q8VE18 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.45■□□□□ 0.7
Smg8Q8VE18 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smg8Q8VE18 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.45■□□□□ 0.7
Smg8Q8VE18 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.45■□□□□ 0.7
Smg8Q8VE18 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smg8Q8VE18 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.45■□□□□ 0.7
Smg8Q8VE18 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smg8Q8VE18 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smg8Q8VE18 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smg8Q8VE18 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smg8Q8VE18 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Smg8Q8VE18 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Smg8Q8VE18 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Smg8Q8VE18 Gm15375-201ENSMUST00000119510 849 ntBASIC19.44■□□□□ 0.7
Smg8Q8VE18 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.44■□□□□ 0.7
Smg8Q8VE18 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.44■□□□□ 0.7
Smg8Q8VE18 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
Smg8Q8VE18 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.44■□□□□ 0.7
Smg8Q8VE18 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smg8Q8VE18 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smg8Q8VE18 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smg8Q8VE18 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smg8Q8VE18 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smg8Q8VE18 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smg8Q8VE18 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.44■□□□□ 0.7
Smg8Q8VE18 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smg8Q8VE18 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smg8Q8VE18 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smg8Q8VE18 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smg8Q8VE18 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smg8Q8VE18 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smg8Q8VE18 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms